fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G31230 ATERF15 ethylene-responsive element binding factor 15 (.1)

>AT2G31230.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstNI, BstUI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, StyI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 606
AciI C|CGC 363
AluI AG|CT 44, 77, 719
ApoI Pu|AATTPy 188, 286
AvaI C|PyCGPuG 337
BanII GPuGCPy|C 45, 720
BclI T|GATCA 378
BfaI C|TAG 534
BsaJI C|CNNGG 277, 356
BsaWI [AT]|CCGG[AT] 165, 492
BsiHKAI G[AT]GC[AT]|C 45, 720
BsoBI C|PyCGPuG 337
Bsp1286I G[GAT]GC[CAT]|C 45, 720
BspHI T|CATGA 477
BsrFI Pu|CCGGPy 530
BssKI |CCNGG 425
BstBI TT|CGAA 524
BstXI CCANNNNN|NTGG 40
BstYI Pu|GATCPy 403, 487
BtgI C|CPuPyGG 277
Cfr10I [AG]|CCGG[TC] 530
DdeI C|TNAG 694
DpnI GA-CH3|TC 89, 249, 377, 402, 486, 549
DpnII |GATC 89, 249, 377, 402, 486, 549
Fnu4HI GC|NGC 291, 363, 384
HaeIII GG|CC 273, 499, 531
HinfI G|ANTC 57, 159, 306, 444, 470
HpaII C|CGG 164, 425, 491, 529
Hpy188I TCN|GA 99, 138, 213
Hpy99I CG[AT]CG| 200
HpyCH4IV A|CGT 201
HpyCH4V TG|CA 289, 409
MboI |GATC 89, 249, 377, 402, 486, 549
MseI T|TAA 177, 417
MslI CAPyNN|NNPuTG 66
MspA1I C[AC]G|C[GT]G 293
MspI C|CGG 164, 425, 491, 529
MwoI GCNNNNN|NNGC 360, 390
N.BstNBI GAGTCNNNN|N 164, 449
NciI CC|[CG]GG 425
NlaIII CATG| 19, 476, 723
RsaI GT|AC 663
SacI GAGCT|C 45, 720
Sau3AI |GATC 89, 249, 377, 402, 486, 549
ScrFI CC|NGG 425
SmlI C|TPyPuAG 107
SspI AAT|ATT 5
Taqƒ¿I T|CGA 523
TfiI G|A[AT]TC 57, 306, 470
TseI G|C[AT]GC 291
Tsp45I |GT[CG]AC 161
Tsp509I |AATT 125, 187, 235, 285, 322, 419, 578
XmnI GAANN|NNTTC 188, 516, 710


Click here to view TAIR data

>AT2G31230.1 length:732
ATGGAATATT CCCAATCTTC CATGTATTCA TCTCCAAGTT CTTGGAGCTC 
50
ATCACAAGAA TCACTCTTAT GGAACGAGAG CTGTTTCTTG GATCAATCAT 
100
CTGAACCTCA AGCCTTCTTT TGCCCTAATT ATGATTACTC CGATGACTTT 
150
TTCTCATTTG AGTCACCGGA GATGATGATT AAGGAAGAAA TTCAAAACGG 
200
CGACGTTTCT AACTCCGAAG AAGAAGAAAA GGTTGGAATT GATGAAGAAA 
250
GATCATACAG AGGAGTGAGG AAAAGGCCGT GGGGGAAATT TGCAGCGGAG 
300
ATAAGAGATT CAACGAGGAA TGGAATTAGG GTTTGGCTCG GGACATTTGA 
350
CAAAGCCGAG GAAGCCGCTC TTGCTTATGA TCAAGCGGCT TTCGCCACAA 
400
AAGGATCTCT TGCAACACTT AATTTCCCGG TGGAAGTGGT TAGAGAGTCG 
450
CTAAAGAAAA TGGAGAATGT GAATCTTCAT GATGGAGGAT CTCCGGTTAT 
500
GGCCTTGAAG AGAAAACATT CTCTTCGAAA CCGGCCTAGA GGGAAAAAGC 
550
GATCCTCTTC TTCTTCTTCT TCTTCTTCTA ATTCTTCTTC TTGCTCTTCT 
600
TCTTCGTCTA CTTCTTCAAC ATCAAGAAGT AGTAGTAAGC AGAGTGTTGT 
650
GAAGCAAGAA AGTGGTACAC TTGTGGTTTT TGAAGATTTA GGTGCTGAGT 
700
ATTTAGAACA ACTTCTTATG AGCTCATGTT GA
750

>AT2G31230.1 longest ORF length:243
MEYSQSSMYS SPSSWSSSQE SLLWNESCFL DQSSEPQAFF CPNYDYSDDF 
50
FSFESPEMMI KEEIQNGDVS NSEEEEKVGI DEERSYRGVR KRPWGKFAAE 
100
IRDSTRNGIR VWLGTFDKAE EAALAYDQAA FATKGSLATL NFPVEVVRES 
150
LKKMENVNLH DGGSPVMALK RKHSLRNRPR GKKRSSSSSS SSSNSSSCSS 
200
SSSTSSTSRS SSKQSVVKQE SGTLVVFEDL GAEYLEQLLM SSC
250