fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G31230 ATERF15 ethylene-responsive element binding factor 15 (.1)

>AT2G31230.1 genomic map

>>Show CDS map




Uncut enzymes: Acc65I, AccIII(BspMII), AclI, AfeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvrII, BaeI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstNI, Bsu36I, BtsI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, NaeI, , NarI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SnaBI, SphI, StuI, TliI, Tth111I, XcmI, XhoI
Name Recognition sequence Cut positions
AatII GACGT|C 222
AccI GT|[AC][TG]AC 2308, 2361, 4674
AccII(FnuDII) CG|CG 2873
AciI C|CGC 890, 2975, 3679, 4431
AflII C|TTAAG 765, 5591
AflIII A|CPuPyGT 471, 723, 1324, 2086, 3717, 5536, 6069, 6145, 6333
AgeI A|CCGGT 3642
AluI AG|CT 628, 732, 874, 1231, 1384, 1598, 1738, 2178, 2278, 3612, 4112, 4145, 4787, 5194, 5495, 5587, 5750, 5773, 5837, 6008, 6077, 6324
ApoI Pu|AATTPy 822, 1093, 1395, 1960, 2167, 2331, 2651, 3292, 3851, 3947, 4256, 4354, 4862, 5126, 5529, 5686
AseI AT|TAAT 27, 322, 975, 1986, 2318, 2396, 2640, 2837, 4852, 5435
AvaI C|PyCGPuG 3359, 4405
AvaII G|G[AT]CC 47, 1804, 3590, 3764, 3829, 3891
BalI TGG|CCA 701, 1520
BanII GPuGCPy|C 4113, 4788
BclI T|GATCA 4446
BfaI C|TAG 4, 192, 556, 839, 1059, 1183, 1630, 2276, 2682, 3001, 4602, 5847
BglII A|GATCT 5293, 6239
BsaAI PyAC|GTPu 2085, 3500, 3618, 3716, 6334
BsaBI GATNN|NNATC 1303
BsaHI GPu|CGPyC 222
BsaJI C|CNNGG 1132, 1160, 3359, 4345, 4424, 5602
BsaWI [AT]|CCGG[AT] 45, 3642, 4233, 4560
BsiHKAI G[AT]GC[AT]|C 4113, 4788
BslI CCNNNNN|NNGG 3234
BsoBI C|PyCGPuG 3359, 4405
Bsp1286I G[GAT]GC[CAT]|C 4113, 4788
BspDI AT|CGAT 1761
BspHI T|CATGA 251, 328, 4545
BsrFI Pu|CCGGPy 3642, 4598
BsrGI T|GTACA 720, 2089
BssKI |CCNGG 3358, 4493
BstBI TT|CGAA 1115, 4592, 5216, 6150
BstF5I GGATGNN| 3368, 5555
BstUI CG|CG 2873
BstXI CCANNNNN|NTGG 1924, 3822, 4108
BstYI Pu|GATCPy 1852, 4471, 4555, 5293, 6239
BstZ17I GTA|TAC 2308, 2361
BtgI C|CPuPyGG 1160, 4345, 5602
BtrI CAC|GTC 6070
Cac8I GCN|NGC 3026
Cfr10I [AG]|CCGG[TC] 3642, 4598
ClaI AT|CGAT 1761
DdeI C|TNAG 915, 1855, 2919, 3155, 4762, 5155, 5866
DpnI GA-CH3|TC 1303, 1666, 1762, 1851, 1939, 2961, 3079, 3414, 3652, 4157, 4317, 4445, 4470, 4554, 4617, 4797, 5188, 5292, 5788, 6238
DpnII |GATC 1303, 1666, 1762, 1851, 1939, 2961, 3079, 3414, 3652, 4157, 4317, 4445, 4470, 4554, 4617, 4797, 5188, 5292, 5788, 6238
DraI TTT|AAA 655, 1090, 1580, 2482, 2498, 2702, 2797, 5755, 6102
EaeI Py|GGCCPu 701, 1520
EcoO109I PuG|GNCCPy 3591, 3892
EcoRV GAT|ATC 644
Fnu4HI GC|NGC 571, 3679, 3871, 4359, 4431, 4452, 5836
HaeIII GG|CC 535, 700, 1519, 1928, 3237, 4341, 4567, 4599, 5824
HincII GTPy|PuAC 288, 3528, 5718
HindIII A|AGCTT 629, 1385, 2179, 3613, 5588, 5751, 6078, 6325
HinfI G|ANTC 1634, 2117, 2986, 3224, 3602, 4125, 4227, 4374, 4512, 4538, 5142, 5165, 5595, 5806
HpaI GTT|AAC 5718
HpaII C|CGG 44, 3358, 3641, 4232, 4493, 4559, 4597
Hpy188I TCN|GA 584, 904, 1399, 1854, 3185, 3265, 3329, 4167, 4206, 4281
Hpy99I CG[AT]CG| 4268, 5388
HpyCH4III ACN|GT 1343, 1746, 1933, 2033, 2094, 3703, 5160, 5714, 5944, 5963, 6344
HpyCH4IV A|CGT 84, 221, 469, 637, 2084, 3335, 3499, 3617, 3686, 3715, 4269, 5305, 5362, 5386, 5606, 5760, 6069, 6143, 6333
HpyCH4V TG|CA 63, 668, 1151, 1210, 2049, 2509, 2956, 3023, 3435, 4357, 4477, 4879
MboI |GATC 1303, 1666, 1762, 1851, 1939, 2961, 3079, 3414, 3652, 4157, 4317, 4445, 4470, 4554, 4617, 4797, 5188, 5292, 5788, 6238
MfeI C|AATTG 94, 563
MscI TGG|CCA 701, 1520
MseI T|TAA 26, 52, 104, 215, 321, 368, 488, 522, 608, 654, 764, 776, 782, 825, 832, 843, 974, 1089, 1267, 1346, 1579, 1704, 1735, 1955, 1985, 2054, 2067, 2317, 2343, 2387, 2395, 2423, 2481, 2497, 2591, 2602, 2628, 2639, 2647, 2696, 2701, 2790, 2796, 2836, 2911, 3047, 3190, 3203, 3280, 3377, 3477, 3492, 3536, 3846, 3865, 4245, 4485, 4829, 4836, 4851, 4949, 5048, 5057, 5082, 5169, 5210, 5260, 5381, 5392, 5422, 5434, 5484, 5506, 5575, 5590, 5615, 5717, 5754, 5870, 5974, 6054, 6101, 6251, 6315, 6327, 6375
MslI CAPyNN|NNPuTG 1159, 4134, 6144
MspA1I C[AC]G|C[GT]G 4361
MspI C|CGG 44, 3358, 3641, 4232, 4493, 4559, 4597
MwoI GCNNNNN|NNGC 890, 3620, 4428, 4458
N.BstNBI GAGTCNNNN|N 3607, 4232, 4517
NciI CC|[CG]GG 3358, 4493
NcoI C|CATGG 5602
NdeI CA|TATG 1192
NlaIII CATG| 250, 327, 392, 722, 1212, 1323, 2120, 2856, 2928, 3016, 3021, 4087, 4544, 4791, 5535, 5601, 5627, 5821, 6138
NlaIV GGN|NCC 48, 1928, 3590, 3830
NsiI ATGCA|T 3436
NspI PuCATG|Py 723, 1213, 1324, 3022, 5536
PciI A|CATGT 723, 1324, 5536
PmeI GTTT|AAAC 2798
PmlI CAC|GTG 3716
PpuMI PuG|G[AT]CCPy 3591, 3892
PsiI TTA|TAA 335, 747, 1417, 2293, 3943, 5337
RsaI GT|AC 97, 271, 719, 2088, 2784, 2922, 3084, 3208, 3548, 3644, 4731, 5303, 6271, 6305
SacI GAGCT|C 4113, 4788
Sau3AI |GATC 1303, 1666, 1762, 1851, 1939, 2961, 3079, 3414, 3652, 4157, 4317, 4445, 4470, 4554, 4617, 4797, 5188, 5292, 5788, 6238
Sau96I G|GNCC 47, 1804, 1928, 3237, 3590, 3764, 3829, 3891
ScaI AGT|ACT 2785, 3549
ScrFI CC|NGG 3358, 4493
SfcI C|TPuPyAG 1602
SmaI CCC|GGG 3359
SmlI C|TPyPuAG 497, 765, 4175, 5591
SpeI A|CTAGT 193, 840, 1184
SspI AAT|ATT 1885, 2600, 2902, 3565, 4073
StyI C|C[AT][AT]GG 1132, 5602
SwaI ATTT|AAAT 1091
Taqƒ¿I T|CGA 346, 381, 1114, 1668, 1760, 1937, 3416, 3572, 3599, 4591, 5186, 5215, 5285, 5539, 5631, 6149
TfiI G|A[AT]TC 1634, 2117, 3224, 4125, 4374, 4538, 5142, 5165, 5595, 5806
TseI G|C[AT]GC 571, 3871, 4359, 5836
Tsp45I |GT[CG]AC 78, 1749, 3164, 3689, 4229, 5947, 6175
Tsp509I |AATT 28, 93, 235, 323, 520, 562, 606, 674, 681, 749, 778, 784, 807, 821, 845, 1042, 1092, 1394, 1555, 1575, 1728, 1811, 1959, 1983, 2065, 2103, 2143, 2166, 2207, 2214, 2296, 2315, 2319, 2330, 2349, 2368, 2393, 2421, 2491, 2578, 2589, 2650, 2688, 2698, 2749, 3066, 3140, 3291, 3494, 3751, 3850, 3946, 4193, 4255, 4303, 4353, 4390, 4487, 4646, 4805, 4838, 4849, 4861, 4882, 4926, 5050, 5059, 5087, 5125, 5212, 5282, 5340, 5436, 5528, 5562, 5613, 5622, 5675, 5685, 5933, 5958, 5976, 6018, 6044, 6058, 6249, 6263, 6297, 6337
TspRI NNCA[CG]TGNN| 78
XbaI T|CTAGA 557
XmaI C|CCGGG 3359
XmnI GAANN|NNTTC 247, 2027, 3292, 3514, 4256, 4584, 4778, 6147


Click here to view TAIR data

>AT2G31230 genomic sequence (4069-4800,) length:6382
atcttctagt tgttttttct gtgggtatta attagtattt cagttccggt 
50
cccttaaagt tatgtgcatt gtatatcagt gacaaacgta atccaattgt 
100
actatttaat gttgtaagaa aatgaaatgt cttgttttat ttctctaatc 
150
agtaaaaaaa aaaaaggtat ctacgataat cgtcaaaatg ttactagtat 
200
attatatgta gaaatgttaa ggacgtccct aaaataaatt atgaaacatt 
250
tcatgatatt attggtttga gtgtacttac aaatagagtt gacaagactt 
300
tgtaacaagc aagtgcgacc cattaattca tgagttataa aataatatcg 
350
aaatgttttt ttgttgttgt taaagaataa tatcgaaatg ttacatgaga 
400
tttttttggt ttattttttt ttctcattta tttttccaag agttttatgt 
450
ggacaacaaa caataaagag acgtgtcgta tgacgcatat taaaacctca 
500
agtaatactt ttcttttaca aaattaaaaa gagagaggcc gagaaagaaa 
550
tacttttcta gacaattgta agcagcaagt ggtatcagat gcttgaaaac 
600
gccagaaaat taaaaaaaaa aaaaaaaaaa gcttcattac gttgatatca 
650
tatatttaaa ctaactcgtt gcagtaatta ctaattacta taaaacattt 
700
tggccaactt gcttgttgtt gtacatgtgt ttgagctata tgtaagttat 
750
aatttcaaca ttttcttaag ttattgttta attttaattg ataactattt 
800
acaaaaataa ttaggaaaaa taaattttaa ctattaaata ctagttaatt 
850
tagtatgata agaagtaatg cgaagagcta cctcgcacct tccgcatcaa 
900
tgtatcagaa aaaaccttag tcgctaacta aaagcggaaa aaacaaactt 
950
attttacgca tataacaaca ctatattaat atatgataca tcaaacacac 
1000
ttcgtaaaca gaaggtattt aggcttatta catcttccta actaattgtg 
1050
cttatatatg ctagtaagtg taatgtgttt ttatctctat ttaaatttga 
1100
aaagggattt caagttcgaa gaagggacga accaaggtta gaacccaagt 
1150
tctgcacagc cgtggataaa acacattaca cttactagta gcatatgctt 
1200
tatatattat gtgcatgtca tattttctat tgagcttctt gttatatgaa 
1250
cataacattg aatggttttt aagaggcatc tcctctaatg cgtcaagcga 
1300
ttttgatcgt tatctccagt ttcacatgtt catctacttt ctaacagtta 
1350
atctttatgg acacaaacat cctctcatat aaataagctt gaccaaattt 
1400
ctgaatgaac aataacttat aataaaccac tatacttatt ttttcacaaa 
1450
ctatgtttca tatctccacc aaaaaacaaa acaaataaac ataatccaaa 
1500
aaaaaagcat agggcttttt ggccatcggt tactccttca aagattgctg 
1550
atacacaatt tagaaaggaa aaaaacaatt ttaaagccat attttattta 
1600
gctatagtaa acacaggttt caggctttgt gctagaatct ggacaaagtt 
1650
tctaatcata aatgttggat cgaggaagtc tcatccagtt tcagttctcg 
1700
gtcttttaag aacaaagaaa aagaaagtca atttagttaa gctaaaactg 
1750
tgacgcttca atcgatcttt attacagaac cctattctcc aaccatatat 
1800
aaatggacca acaattttga ccaatggttt tcatttttct gtttaggttt 
1850
tggatctgag aaatatctat tttgtctttg tgccaatatt agtggctgtc 
1900
ggcacatcaa gaaaagacca ctctcttggg gccacagttc gatctatctt 
1950
tttctcttaa aattctttat caaacaaaac tcaaaattaa tgatttcaac 
2000
tttggagaaa gaaaaaaaac aagaatgatt tcaaccgtaa aaatagttat 
2050
tgcagttaag acgaaaaatt aaaaaatgtg gtattacgtg tacaaccgtt 
2100
ggataattgg caataatgaa tcatgtggtt actgcgaact ttacaatttt 
2150
tctatcttgc tattctaaat ttattttcaa gctttcccta tgaaaaaaaa 
2200
aagatacgaa ttagtaattc taaaaacaaa acgaagtata tgtcaaggga 
2250
agattttgta aacctacaaa tcagtaacta gctttataga acttataaat 
2300
tgctattgta taccctaatt aattgttgtc aaatttgttg ggcattaact 
2350
aattgctgtt gtatacccta atttgttggg cattatactt aactaattaa 
2400
taagttgctg aagccgatgt aaaattaaca atctggtgaa atagtgtgat 
2450
agacatatca catatacacc agtcttgtct gtttaaaaca tcaattattt 
2500
aaaacaatgt tgcaaaactt ttattattgt tgttatgtgt tactcatcta 
2550
tcattttgag aaagagtgtc attttgacca atttcacaca aattaagaaa 
2600
atattaaaac tacaagtgtt tgtctctatt taataagtga ttaataactt 
2650
aaattcaata aaaatagttg aggtaaaggt aaactagaaa attagtttta 
2700
atttaaaaaa tagcattgaa aatgtaaaac aacactattt gcgagaaaac 
2750
aatttgtgga acgatactat ttgtgaaaaa aagaagtact attaagttta 
2800
aacactattc tttattttta gtttctgtgt ttcgttatta atgtaagaca 
2850
atcccaacat gaagacaatc tcaacgcgat gaaaaaaaaa ataaacaaaa 
2900
aaatatttag ccttaacatc taagtaccac atggattttt tttcaggttt 
2950
tttggtatgc aagatcagtt caatacccgc ctataagact ccacactcta 
3000
ccctagtttt gagaacacat gacatgcaag cgacctaata gttttgactt 
3050
aaccttgtat cttctataat ttgtaaaatg gatcagtaca taacatcctt 
3100
gcctacatac atctaaccaa aagtttatcc tcttattcca caatttcttg 
3150
ctaaccttag atatgtgact gctactcttt agtcatcgga tttaatatat 
3200
atggttaatg tacttatgaa aactgaatcc tttggttggg cctttgtggt 
3250
atgtcatcca agaaatctga caagaccaga cttaaacgaa caaattcaaa 
3300
ataacaacga ttgtcatttt tttattgtat cggaagacgt ggaagatggt 
3350
atttgatgcc cggggaggat ggtgtttctt aatatacaca ctctaaaaac 
3400
atttgccaca aatgagatcg aaatatactc aatctatgca ttattttatt 
3450
ttatttttat tattatgagt atctattgtt aatagtatat tcgttaattc 
3500
acgtattggg aaatgtttct ttttccagtc aactctttta agactttcag 
3550
tactatcgtt actcaatatt gcctcgaagg acaataagcg ggtcctaaaa 
3600
tcgagtctgt caaagcttac gtggcacttg tttgccacat caccggtact 
3650
aatgatctca tctattttgt cattttctcg ccgcctaacg tcactccctc 
3700
taaacagttt tacgccacgt gtaaataaaa atcacccatt tatttttctt 
3750
tgaattggag gataggtccg tataaaatct tgtttttttc ccaaaataca 
3800
ttgaaaaaga aaataccagt tttgtggttg gtccccattc ggttgtgtta 
3850
aaattttatt agttttttaa ggcagccata tttgtctaat aggacctatg 
3900
ataaacaata taacaataaa atacttccca ctttcatata tcttataaat 
3950
tccgtgtctc ttatatatat aggattaggt tttgaaataa acttattgcc 
4000
acaacaagaa gagataacaa aaagaaaaga aaaagagaaa tcgtaaaaaa 
4050
aaaaaaaaaa aaaaacttAT GGAATATTCC CAATCTTCCA TGTATTCATC 
4100
TCCAAGTTCT TGGAGCTCAT CACAAGAATC ACTCTTATGG AACGAGAGCT 
4150
GTTTCTTGGA TCAATCATCT GAACCTCAAG CCTTCTTTTG CCCTAATTAT 
4200
GATTACTCCG ATGACTTTTT CTCATTTGAG TCACCGGAGA TGATGATTAA 
4250
GGAAGAAATT CAAAACGGCG ACGTTTCTAA CTCCGAAGAA GAAGAAAAGG 
4300
TTGGAATTGA TGAAGAAAGA TCATACAGAG GAGTGAGGAA AAGGCCGTGG 
4350
GGGAAATTTG CAGCGGAGAT AAGAGATTCA ACGAGGAATG GAATTAGGGT 
4400
TTGGCTCGGG ACATTTGACA AAGCCGAGGA AGCCGCTCTT GCTTATGATC 
4450
AAGCGGCTTT CGCCACAAAA GGATCTCTTG CAACACTTAA TTTCCCGGTG 
4500
GAAGTGGTTA GAGAGTCGCT AAAGAAAATG GAGAATGTGA ATCTTCATGA 
4550
TGGAGGATCT CCGGTTATGG CCTTGAAGAG AAAACATTCT CTTCGAAACC 
4600
GGCCTAGAGG GAAAAAGCGA TCCTCTTCTT CTTCTTCTTC TTCTTCTAAT 
4650
TCTTCTTCTT GCTCTTCTTC TTCGTCTACT TCTTCAACAT CAAGAAGTAG 
4700
TAGTAAGCAG AGTGTTGTGA AGCAAGAAAG TGGTACACTT GTGGTTTTTG 
4750
AAGATTTAGG TGCTGAGTAT TTAGAACAAC TTCTTATGAG CTCATGTTGA 
4800
tcttgtaatt gatttcagca aaagccacta ttaaacttta attttgtgat 
4850
aattaatctt gaaatttgtt ttgttcattc tgcaatttct ttggttctct 
4900
tattttttgt ttgttgtatc caaatgaaat tattggaaga gatggtgatg 
4950
ttaaagtgta tatatataaa aaaaaaactc ttattttttg tcttgatgaa 
5000
aaaaaaatct attattgcgt tatatggctg aaaagtgtgt gtgtccacct 
5050
taattgcttt aatttttttt ttttttttgt gctttaataa ttttcatttt 
5100
ttgcgtgaaa gatattagag gatataaatt tctccaagta acgattcctg 
5150
taaatctaag actgtgaatc ttaaaaaatc aatcaagtcg atccaagcta 
5200
taaagttatt cttaattcga ataacaaaat ctaaccaaaa agaagttgat 
5250
aagataaact attaagtttt gtgtgtgtag ggtaattcga ttagatctat 
5300
aaaggtacgt tcctgttata ttgtataaat gttatattat aaattatata 
5350
aaatatcatt atgacgttca tattatattg tgttaatacg tcgttaatga 
5400
tgctttcgtt atcatcatta ttgttaatct cattattaat tggctgtttg 
5450
actttcttat tacttttttt gtgtgtgaaa cattcttaac ccaataagct 
5500
ataaagatta accataggcg ataaaatcaa attctacatg tcgatatttt 
5550
gttggatgtc gtaaattgaa acattcttaa cctaataaag cttaagattc 
5600
accatggacg ttggaattaa aataatttca tgtcgagatt ttttttgttt 
5650
tttggtagag tttgaagtat tgatacaatt atttgaaatt ttgacaaaaa 
5700
ataaataaac atatactgtt aacagaaaaa tactgaaaac ctaaagaaaa 
5750
aagctttaaa aacgtgattg gtttagctct aaagaacccg atccctcaac 
5800
tccaaagaat ccaagtcttc atcatggcct ccacgagcag ctcctatcct 
5850
agacaagccc tcaaacctca gttaaatgct tacaacttct ttgaggataa 
5900
acgaaaaaac ggaatggcaa taacggagtt gaacaattag agaaaccgtc 
5950
accaaccaca attaccgttt tttttttaat ttccttttgc caaatgtgaa 
6000
tatgtgaaaa gctatatata attatcaagt gatatgcttg tccagaatta 
6050
gtaagttaaa attgtgatac acgtcataag cttttcacag acatacttta 
6100
ttttaaatgt gaaaatagac ttcaaaacaa aaaaatacac atgaacgtgt 
6150
tcgaaatagg gaataagcaa aaagggtgac agacaacgag caaagacaag 
6200
agcgttgaga caaaatcaca tccttgtttt tttgttttag atctaaaaca 
6250
aattaacatt cactaattga tagtacattt tttgttttgt caaagcctaa 
6300
ttgatagtac acattattaa ataaaagctt aaacacgtaa ttcaacggta 
6350
aatgaaaaat cgtaaaaaga accagattaa aa
6400