Locus |
Common name |
Short description |
AT2G31380 |
STH |
salt tolerance homologue (.1) |
>AT2G31380.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
439 |
NheI
| G|CTAGC |
115 |
PstI
| CTGCA|G |
228, 465 |
SpeI
| A|CTAGT |
325 |
StyI
| C|C[AT][AT]GG |
708 |
Click here to view TAIR data
>AT2G31380.1 length:717
ATGAAGATAC AATGTGATGT GTGTGAGAAA GCTCCGGCCA CGCTTATATG | 50 |
TTGTGCTGAT GAAGCTGCTC TCTGCGCTAA ATGTGACGTT GAGGTTCATG | 100 |
CTGCTAATAA ACTCGCTAGC AAACACCAAC GCCTTTTTCT TGACTCTCTC | 150 |
TCAACTAAAT TCCCTCCCTG CGACATCTGC CTTGAGAAGG CAGCTTTCAT | 200 |
ATTCTGTGTA GAGGATAGGG CTCTGCTCTG CAGAGATTGC GATGAGGCGA | 250 |
CCCATGCGCC AAATACTCGC TCTGCTAATC ACCAGAGGTT CTTAGCCACT | 300 |
GGAATCCGAG TTGCTCTTAG TTCCACTAGT TGCAATCAAG AAGTGGAAAA | 350 |
GAATCACTTT GACCCATCTA ATCAGCAGAG TCTCTCTAAA CCGCCAACTC | 400 |
AGCAACCCGC TGCTCCATCT CCTTTGTGGG CTACCGATGA ATTCTTCAGC | 450 |
TACTCTGATC TTGACTGCAG TAATAAGGAG AAAGAGCAAC TCGATCTCGG | 500 |
GGAGCTGGAT TGGCTTGCAG AGATGGGTCT GTTTGGTGAC CAGCCTGATC | 550 |
AAGAGGCTCT ACCGGTAGCC GAAGTTCCCG AGCTTTCCTT TTCACATTTG | 600 |
GCTCATGCTC ATTCCTACAA CAGACCTATG AAGTCCAATG TACCCAACAA | 650 |
GAAGCAGAGG CTTGAGTACC GGTATGATGA TGAAGAAGAG CACTTCCTAG | 700 |
TCCCCGACCT AGGCTAA | 750 |
>AT2G31380.1 longest ORF length:238
MKIQCDVCEK APATLICCAD EAALCAKCDV EVHAANKLAS KHQRLFLDSL | 50 |
STKFPPCDIC LEKAAFIFCV EDRALLCRDC DEATHAPNTR SANHQRFLAT | 100 |
GIRVALSSTS CNQEVEKNHF DPSNQQSLSK PPTQQPAAPS PLWATDEFFS | 150 |
YSDLDCSNKE KEQLDLGELD WLAEMGLFGD QPDQEALPVA EVPELSFSHL | 200 |
AHAHSYNRPM KSNVPNKKQR LEYRYDDEEE HFLVPDLG | 250 |
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