fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G31380 STH salt tolerance homologue (.1)

>AT2G31380.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 439
NheI G|CTAGC 115
PstI CTGCA|G 228, 465
SpeI A|CTAGT 325
StyI C|C[AT][AT]GG 708


Click here to view TAIR data

>AT2G31380.1 length:717
ATGAAGATAC AATGTGATGT GTGTGAGAAA GCTCCGGCCA CGCTTATATG 
50
TTGTGCTGAT GAAGCTGCTC TCTGCGCTAA ATGTGACGTT GAGGTTCATG 
100
CTGCTAATAA ACTCGCTAGC AAACACCAAC GCCTTTTTCT TGACTCTCTC 
150
TCAACTAAAT TCCCTCCCTG CGACATCTGC CTTGAGAAGG CAGCTTTCAT 
200
ATTCTGTGTA GAGGATAGGG CTCTGCTCTG CAGAGATTGC GATGAGGCGA 
250
CCCATGCGCC AAATACTCGC TCTGCTAATC ACCAGAGGTT CTTAGCCACT 
300
GGAATCCGAG TTGCTCTTAG TTCCACTAGT TGCAATCAAG AAGTGGAAAA 
350
GAATCACTTT GACCCATCTA ATCAGCAGAG TCTCTCTAAA CCGCCAACTC 
400
AGCAACCCGC TGCTCCATCT CCTTTGTGGG CTACCGATGA ATTCTTCAGC 
450
TACTCTGATC TTGACTGCAG TAATAAGGAG AAAGAGCAAC TCGATCTCGG 
500
GGAGCTGGAT TGGCTTGCAG AGATGGGTCT GTTTGGTGAC CAGCCTGATC 
550
AAGAGGCTCT ACCGGTAGCC GAAGTTCCCG AGCTTTCCTT TTCACATTTG 
600
GCTCATGCTC ATTCCTACAA CAGACCTATG AAGTCCAATG TACCCAACAA 
650
GAAGCAGAGG CTTGAGTACC GGTATGATGA TGAAGAAGAG CACTTCCTAG 
700
TCCCCGACCT AGGCTAA
750

>AT2G31380.1 longest ORF length:238
MKIQCDVCEK APATLICCAD EAALCAKCDV EVHAANKLAS KHQRLFLDSL 
50
STKFPPCDIC LEKAAFIFCV EDRALLCRDC DEATHAPNTR SANHQRFLAT 
100
GIRVALSSTS CNQEVEKNHF DPSNQQSLSK PPTQQPAAPS PLWATDEFFS 
150
YSDLDCSNKE KEQLDLGELD WLAEMGLFGD QPDQEALPVA EVPELSFSHL 
200
AHAHSYNRPM KSNVPNKKQR LEYRYDDEEE HFLVPDLG
250