fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G31730 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT2G31730.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
SpeI A|CTAGT 162
StyI C|C[AT][AT]GG 113
XbaI T|CTAGA 10, 204


Click here to view TAIR data

>AT2G31730.1 length:462
ATGGAATACT CTAGAGACTC GGCAGAGATG ATGATGGAGA CTAAGCGCAA 
50
TGTCTACTCG CTTGAAGATA ACAAAATTAA ACGACACAAG TCATCTGATC 
100
TCTCTTTCTC TTCCAAGGAG AGGAAAGACA AATTAGCAGA ACGTATTTCA 
150
GCTCTTCAAC AACTAGTTTC CCCTTACGGA AAGACCGACA CTGCATCAGT 
200
TCTTCTAGAG GGAATGCAAT ACATTCAGTT TCTTCAAGAA CAAGTCAAGG 
250
TTCTAAGTGC TCCTTATCTG CAAGCAACCC CTTCTACTAC AGAGGAGGAA 
300
GTGGAAGAGT ACAGCTTAAG AAGTAAAGGG CTATGTCTTG TTCCATTGGA 
350
GTATACATCA GAAGTTGCTC AAACCAATGG TGCTGATATT TGGGCTCCTG 
400
TGAAGACTCC AACATCTTCT CATGCTTTTA ATCTCTCGTC TTCTAATTCG 
450
CCCTTTCAAT GA
500

>AT2G31730.1 longest ORF length:153
MEYSRDSAEM MMETKRNVYS LEDNKIKRHK SSDLSFSSKE RKDKLAERIS 
50
ALQQLVSPYG KTDTASVLLE GMQYIQFLQE QVKVLSAPYL QATPSTTEEE 
100
VEEYSLRSKG LCLVPLEYTS EVAQTNGADI WAPVKTPTSS HAFNLSSSNS 
150
PFQ
200