| Locus |
Common name |
Short description |
| AT2G32370 |
HDG3 |
homeodomain GLABROUS 3 (.1) |
>AT2G32370.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, AccIII(BspMII), AclI, AflII, AgeI, AhdI, AlwI, ApaI, ApaLI, AscI, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BsrFI, BsrGI, BssHII, BstAPI, BstEII, BstZ17I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoRI, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PvuI, PvuII, RsrII, SacII, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, StuI, SwaI, XbaI, XmaI
| Name |
Recognition sequence |
Cut positions |
| Acc65I
| G|GTACC |
18 |
| AccI
| GT|[AC][TG]AC |
1431, 1560 |
| AccII(FnuDII)
| CG|CG |
1127 |
| AciI
| C|CGC |
1112, 1126, 1144, 1234, 1378 |
| AfeI
| AGC|GCT |
304 |
| AflIII
| A|CPuPyGT |
1302 |
| AluI
| AG|CT |
187, 250, 451, 777, 836, 841, 1133, 1363, 1507, 1882, 2096 |
| AlwNI
| CAGNNN|CTG |
2075 |
| Aor51HI(Eco47III)
| AGC|GCT |
304 |
| ApoI
| Pu|AATTPy |
337, 657 |
| AseI
| AT|TAAT |
1347 |
| AvaI
| C|PyCGPuG |
702 |
| AvaII
| G|G[AT]CC |
320, 717, 888, 2073 |
| BanI
| G|GPyPuCC |
18 |
| BanII
| GPuGCPy|C |
778 |
| BclI
| T|GATCA |
1461 |
| BfaI
| C|TAG |
834, 891, 1115, 1419, 1833, 2082 |
| BlpI
| GC|TNAGC |
840, 1511 |
| BsaJI
| C|CNNGG |
770, 914, 923, 1283, 1482, 1938 |
| BsaWI
| [AT]|CCGG[AT] |
1456 |
| BsiHKAI
| G[AT]GC[AT]|C |
520, 778 |
| BslI
| CCNNNNN|NNGG |
480, 704, 897, 1712, 2060, 2140 |
| BsoBI
| C|PyCGPuG |
702 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
520, 778 |
| BspHI
| T|CATGA |
1032 |
| BspT107I(HgiCI)
| G|G[TC][AG]CC |
18 |
| BsrBI
| GAG|CGG |
1411, 1513 |
| BsrDI
| GCAATGNN| |
945 |
| BsrI
| ACTGGN| |
715, 955, 1357 |
| BssKI
| |CCNGG |
922, 1024, 1626, 1638, 2013 |
| BssSI
| C|TCGTG |
937 |
| BstBI
| TT|CGAA |
514, 908 |
| BstF5I
| GGATGNN| |
672, 816, 856, 1250, 1738 |
| BstNI
| CC|[AT]GG |
922, 1024, 1626, 2013 |
| BstUI
| CG|CG |
1127 |
| BstXI
| CCANNNNN|NTGG |
1944 |
| BstYI
| Pu|GATCPy |
676 |
| Bsu36I
| CC|TNAGG |
424, 2078 |
| BtgI
| C|CPuPyGG |
770, 1482, 1938 |
| Cac8I
| GCN|NGC |
1496 |
| DdeI
| C|TNAG |
4, 300, 395, 423, 475, 679, 839, 1093, 1510, 1707, 2077, 2088, 2113 |
| DpnI
| GA-CH3|TC |
122, 331, 559, 675, 742, 1460, 1622, 1949, 1966, 2031, 2143 |
| DpnII
| |GATC |
122, 331, 559, 675, 742, 1460, 1622, 1949, 1966, 2031, 2143 |
| EcoNI
| CCTNN|NNNAGG |
1712 |
| EcoO109I
| PuG|GNCCPy |
2074 |
| EcoRV
| GAT|ATC |
591, 1416, 1591 |
| Fnu4HI
| GC|NGC |
1053, 1234, 1371, 1656 |
| HaeII
| PuGCGC|Py |
304 |
| HaeIII
| GG|CC |
485 |
| HhaI
| GCG|C |
303, 1901 |
| HinP1I
| G|CGC |
303, 1901 |
| HincII
| GTPy|PuAC |
993, 1431 |
| HindIII
| A|AGCTT |
251, 1364 |
| HinfI
| G|ANTC |
114, 371, 407, 983, 1028, 1256, 1452, 2067, 2117, 2123 |
| HpaII
| C|CGG |
1005, 1455, 1638, 1819 |
| Hpy188I
| TCN|GA |
233, 240, 259, 329, 396, 404, 410, 429, 691, 1253, 1594, 1708, 2120, 2165 |
| Hpy99I
| CG[AT]CG| |
1552 |
| HpyCH4III
| ACN|GT |
136, 809, 1150, 1692, 1804, 2133 |
| HpyCH4IV
| A|CGT |
869 |
| HpyCH4V
| TG|CA |
493, 721, 931, 975, 1266, 1318, 1654, 1745, 1761, 1807, 2104 |
| KpnI
| GGTAC|C |
18 |
| MboI
| |GATC |
122, 331, 559, 675, 742, 1460, 1622, 1949, 1966, 2031, 2143 |
| MfeI
| C|AATTG |
310, 497, 1731 |
| MseI
| T|TAA |
825, 1346 |
| MslI
| CAPyNN|NNPuTG |
278, 629, 1943 |
| MspA1I
| C[AC]G|C[GT]G |
439, 581, 1380 |
| MspI
| C|CGG |
1005, 1455, 1638, 1819 |
| MwoI
| GCNNNNN|NNGC |
765, 798, 939, 1053, 1112, 1371, 1901 |
| N.BstNBI
| GAGTCNNNN|N |
2072 |
| NciI
| CC|[CG]GG |
1638 |
| NcoI
| C|CATGG |
770, 1482, 1938 |
| NlaIII
| CATG| |
13, 161, 748, 769, 973, 1031, 1290, 1301, 1481, 1495, 1823, 1937 |
| NlaIV
| GGN|NCC |
18, 321, 344, 620, 766 |
| NsiI
| ATGCA|T |
1267 |
| NspI
| PuCATG|Py |
1302, 1496 |
| PaeR7I
| C|TCGAG |
702 |
| PciI
| A|CATGT |
1302 |
| PflFI
| GACN|NNGTC |
1557 |
| PflMI
| CCANNNN|NTGG |
2060 |
| PpuMI
| PuG|G[AT]CCPy |
2074 |
| PspGI
| |CC[AT]GG |
922, 1024, 1626, 2013 |
| PstI
| CTGCA|G |
722 |
| RsaI
| GT|AC |
17, 292, 1096, 1353, 1389, 1397, 2001, 2127 |
| SacI
| GAGCT|C |
778 |
| SalI
| G|TCGAC |
1431 |
| Sau3AI
| |GATC |
122, 331, 559, 675, 742, 1460, 1622, 1949, 1966, 2031, 2143 |
| Sau96I
| G|GNCC |
320, 717, 888, 2073 |
| ScrFI
| CC|NGG |
922, 1024, 1626, 1638, 2013 |
| SfcI
| C|TPuPyAG |
722 |
| SmlI
| C|TPyPuAG |
150, 702, 794 |
| SphI
| GCATG|C |
1496 |
| SspI
| AAT|ATT |
1566 |
| StyI
| C|C[AT][AT]GG |
770, 1283, 1482, 1938 |
| Taqƒ¿I
| T|CGA |
132, 513, 660, 701, 907, 1185, 1197, 1430, 1449 |
| TfiI
| G|A[AT]TC |
114, 371, 407, 983, 1256, 1452, 2117, 2123 |
| TliI
| C|TCGAG |
702 |
| TseI
| G|C[AT]GC |
1053, 1371, 1656 |
| Tsp45I
| |GT[CG]AC |
220, 576, 1119 |
| Tsp509I
| |AATT |
309, 336, 496, 656, 1009, 1344, 1730 |
| TspRI
| NNCA[CG]TGNN| |
24, 139, 715, 810, 1406, 1693 |
| Tth111I
| GACN|NNGTC |
1557 |
| XcmI
| CCANNNNN|NNNNTGG |
498 |
| XhoI
| C|TCGAG |
702 |
| XmnI
| GAANN|NNTTC |
114, 455 |
Click here to view TAIR data
>AT2G32370.1 length:2178
ATGTCTCAGT CAAACATGGT ACCAGTGGCT AACAACGGAG ACAACAACAA | 50 |
CGACAACGAA AACAACAACA ACAACAACAA CAATGGTGGA ACTGACAACA | 100 |
CTAATGCTGG AAATGATTCT GGAGATCAAG ATTTCGACAG TGGGAATACC | 150 |
TCAAGTGGCA ATCATGGAGA AGGGTTGGGA AACAATCAAG CTCCTCGTCA | 200 |
TAAGAAGAAA AAATACAATC GTCACACCCA ACTTCAGATT TCGGAGATGG | 250 |
AAGCTTTCTT CAGAGAGTGT CCTCACCCAG ATGACAAACA AAGGTACGAC | 300 |
CTTAGCGCTC AATTGGGATT GGACCCTGTT CAGATCAAAT TCTGGTTCCA | 350 |
GAACAAACGC ACTCAAAACA AGAATCAACA AGAACGCTTT GAGAACTCAG | 400 |
AACTTCGGAA TCTGAACAAC CACCTTAGGT CTGAAAATCA GCGGTTACGA | 450 |
GAAGCTATTC ATCAAGCCTT ATGCCCTAAG TGTGGAGGCC AAACTGCAAT | 500 |
TGGCGAAATG ACCTTCGAAG AGCACCATCT TCGCATCCTC AACGCTCGTT | 550 |
TGACTGAAGA GATCAAGCAA CTTTCCGTGA CAGCGGAAAA GATATCAAGG | 600 |
CTTACGGGGA TACCAGTAAG GAGCCATCCC CGTGTGTCTC CTCCTAATCC | 650 |
TCCTCCAAAT TTCGAGTTCG GGATGGGATC TAAGGGAAAT GTCGGAAACC | 700 |
ACTCGAGGGA AACCACTGGA CCTGCAGATG CTAATACCAA GCCGATCATC | 750 |
ATGGAGTTGG CATTTGGAGC CATGGAGGAG CTCTTGGTGA TGGCTCAAGT | 800 |
GGCTGAACCA CTGTGGATGG GAGGATTTAA TGGCACTAGC TTAGCTTTGA | 850 |
ACTTGGATGA ATACGAAAAG ACGTTTCGCA CGGGTCTCGG TCCTAGACTT | 900 |
GGCGGGTTTC GAACCGAGGC ATCCAGGGAA ACTGCACTCG TGGCAATGTG | 950 |
TCCTACTGGC ATTGTTGAAA TGCTCATGCA AGAGAATCTG TGGTCAACAA | 1000 |
TGTTTGCCGG AATTGTTGGT AGAGCCAGGA CTCATGAACA GATAATGGCT | 1050 |
GATGCTGCTG GAAACTTCAA TGGAAATCTC CAAATAATGA GTGCTGAGTA | 1100 |
CCAAGTGCTT TCCCCGCTAG TCACAACCCG CGAAAGCTAC TTCGTCCGCT | 1150 |
ACTGTAAGCA ACAAGGAGAG GGTTTGTGGG CGGTGGTCGA TATTTCCATC | 1200 |
GACCATCTCC TCCCAAACAT CAACCTAAAA TGTCGCCGCC GACCCTCTGG | 1250 |
ATGTCTGATT CAAGAAATGC ATAGTGGTTA CTCCAAGGTT ACATGGGTGG | 1300 |
AACATGTGGA AGTAGATGAT GCAGGAAGTT ACAGCATCTT TGAGAAATTA | 1350 |
ATCTGTACTG GTCAAGCTTT TGCTGCTAAC CGCTGGGTTG GTACATTGGT | 1400 |
ACGCCAGTGT GAGCGGATAT CTAGCATCTT GTCGACAGAT TTTCAATCTG | 1450 |
TCGATTCCGG TGATCACATA ACGCTAACTA ACCATGGAAA GATGAGCATG | 1500 |
CTGAAGATAG CTGAGCGGAT TGCGAGAACC TTCTTTGCTG GAATGACCAA | 1550 |
TGCGACGGGG TCTACAATAT TTTCTGGTGT TGAAGGAGAA GATATCAGAG | 1600 |
TGATGACAAT GAAGAGCGTG AATGATCCAG GAAAGCCTCC CGGTGTCATT | 1650 |
ATTTGTGCAG CCACTTCCTT TTGGCTTCCT GCTCCTCCTA ACACTGTCTT | 1700 |
TGACTTCCTC AGAGAGGCTA CTCACCGACA CAATTGGGAT GTTCTCTGCA | 1750 |
ACGGAGAGAT GATGCACAAG ATAGCAGAGA TTACGAATGG GATAGACAAA | 1800 |
AGGAACTGTG CAAGTTTACT CCGGCATGGA CACACTAGCA AGAGCAAGAT | 1850 |
GATGATAGTT CAAGAGACTT CTACTGACCC AACAGCTTCA TTTGTGCTTT | 1900 |
ATGCGCCTGT TGATATGACA TCAATGGATA TTACTCTCCA TGGAGGTGGT | 1950 |
GATCCTGACT TTGTGGTGAT CCTGCCTTCT GGTTTTGCTA TTTTTCCAGA | 2000 |
TGGTACGGGT AAGCCTGGAG GAAAAGAAGG AGGATCACTT TTGACCATTT | 2050 |
CCTTCCAAAT GCTGGTTGAG TCAGGTCCTG AGGCTAGGCT GAGTGTTAGC | 2100 |
TCTGTTGCAA CTACTGAGAA TCTGATTCGT ACAACCGTGC GGAGGATCAA | 2150 |
AGATTTGTTT CCTTGTCAGA CTGCTTGA | 2200 |
>AT2G32370.1 longest ORF length:725
MSQSNMVPVA NNGDNNNDNE NNNNNNNNGG TDNTNAGNDS GDQDFDSGNT | 50 |
SSGNHGEGLG NNQAPRHKKK KYNRHTQLQI SEMEAFFREC PHPDDKQRYD | 100 |
LSAQLGLDPV QIKFWFQNKR TQNKNQQERF ENSELRNLNN HLRSENQRLR | 150 |
EAIHQALCPK CGGQTAIGEM TFEEHHLRIL NARLTEEIKQ LSVTAEKISR | 200 |
LTGIPVRSHP RVSPPNPPPN FEFGMGSKGN VGNHSRETTG PADANTKPII | 250 |
MELAFGAMEE LLVMAQVAEP LWMGGFNGTS LALNLDEYEK TFRTGLGPRL | 300 |
GGFRTEASRE TALVAMCPTG IVEMLMQENL WSTMFAGIVG RARTHEQIMA | 350 |
DAAGNFNGNL QIMSAEYQVL SPLVTTRESY FVRYCKQQGE GLWAVVDISI | 400 |
DHLLPNINLK CRRRPSGCLI QEMHSGYSKV TWVEHVEVDD AGSYSIFEKL | 450 |
ICTGQAFAAN RWVGTLVRQC ERISSILSTD FQSVDSGDHI TLTNHGKMSM | 500 |
LKIAERIART FFAGMTNATG STIFSGVEGE DIRVMTMKSV NDPGKPPGVI | 550 |
ICAATSFWLP APPNTVFDFL REATHRHNWD VLCNGEMMHK IAEITNGIDK | 600 |
RNCASLLRHG HTSKSKMMIV QETSTDPTAS FVLYAPVDMT SMDITLHGGG | 650 |
DPDFVVILPS GFAIFPDGTG KPGGKEGGSL LTISFQMLVE SGPEARLSVS | 700 |
SVATTENLIR TTVRRIKDLF PCQTA | 750 |
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