fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G32930 ZFN2 zinc finger nuclease 2 (.1.2)

>AT2G32930.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 1164
NdeI CA|TATG 500, 578
PstI CTGCA|G 1151, 1310
StyI C|C[AT][AT]GG 648


Click here to view TAIR data

>AT2G32930.1 length:1362
ATGTCGGAAA CTCAGCAGCA GGTTCAGAAC TCTACTGGGT CGATTCGATC 
50
TCCCGACAAA ATTGAAGATA CCTTCAGGAG GATGAAAGTT AATGAAGACA 
100
ATATGGAGCA ATCTAGTCCA TATCCTGATC GTCCTGGTGA GCGAGATTGC 
150
CAGTTCTTTC TGAGAACTGG TCAGTGTGGC TATGGAAACT CTTGTCGATA 
200
CAATCATCCT CTTACTAATC TTCCACAGGG TATTATTTAT TACAGAGACC 
250
AATTGCCTGA GAGAGTTGGA CAGCCTGACT GTGAGACAGG AGCCTGTAAG 
300
TATGGCCCAA CATGTAAATA TCACCACCCT AAAGACAGGA ATGGTGCTGG 
350
ACCCGTGCTG TTCAATGTTC TCGGTTTGCC TATGCGGCAG GGTGAGAAGC 
400
CATGTCCATA TTACATGCAG ACAGGATTGT GTCGATTCGG AGTTGCCTGC 
450
AAATTCCATC ATCCTCATCC TCATTCTCAG CCTTCTAATG GCCACTCTGC 
500
ATATGCAATG TCCAGCTTTC CGTCTGTTGG TTTTCCTTAT GCCAGTGGAA 
550
TGACAATGGT GTCTTTGCCT CCTGCAACAT ATGGAGCTAT TCCACGTCCT 
600
CAAGTTCCTC AGTCTCAGGC CTATATGCCC TACATGGTTG CACCCTCCCA 
650
AGGCCTTTTA CCTCCTCAAG GCTGGGCCAC TTACATGACT GCATCTAACC 
700
CCATTTACAA TATGAAAACT CAACTCGACT CCAGTTCTAG CGCATCGGTG 
750
GCTGTGACCG TGACATCACA TCATCACAGT TTTTCTGAAA GAGCTGAATG 
800
TAGGTTTTTT ATGAACACTG GAACTTGTAA ATATGGTGAT GATTGCAAAT 
850
ACAGTCATCC GAAAGAAAGA TTGTTACAAT CACCACCAAC TCTCTTGAAC 
900
CCTATTGTTC TTCCAGCAAG ACCAGGACAG CCAGCATGTG GTAACTTCAA 
950
GGCCTACGGA TTTTGCAAGT TTGGAGCAAA CTGCAAATTT GATCACTCAA 
1000
TGCTGCTAAA CCCTTATAAC AATACGGGCT TGGCCATGTC TTCTCTGCCT 
1050
ACTCCTTATC CTTATGCTCC ACCTGTTTCA ACTAATTTGA GGATCTCATC 
1100
GCCACCAAGC CCCTCTGATA TGACTACCCT ATCCAATGGT AAACCCGCTG 
1150
CTGCAGAAGC TCAAAGCTTG GAGACTGAGA AACAAGACGA TAGTCCAACA 
1200
GAACCAGAAA AATCAGAAGT GGAGGACTCA TTGCCACCAA ACGGCTCTGA 
1250
TTCAACCTCC CTGCCCAATG ATAAACCTGA TGCAGAGACT GAGAAACAAG 
1300
ACGATGATTC TGCAGAACTG GACAGCTCAA AAGTGCAGGA TTCATCTGAT 
1350
AAATCTACAT GA
1400

>AT2G32930.1 longest ORF length:453
MSETQQQVQN STGSIRSPDK IEDTFRRMKV NEDNMEQSSP YPDRPGERDC 
50
QFFLRTGQCG YGNSCRYNHP LTNLPQGIIY YRDQLPERVG QPDCETGACK 
100
YGPTCKYHHP KDRNGAGPVL FNVLGLPMRQ GEKPCPYYMQ TGLCRFGVAC 
150
KFHHPHPHSQ PSNGHSAYAM SSFPSVGFPY ASGMTMVSLP PATYGAIPRP 
200
QVPQSQAYMP YMVAPSQGLL PPQGWATYMT ASNPIYNMKT QLDSSSSASV 
250
AVTVTSHHHS FSERAECRFF MNTGTCKYGD DCKYSHPKER LLQSPPTLLN 
300
PIVLPARPGQ PACGNFKAYG FCKFGANCKF DHSMLLNPYN NTGLAMSSLP 
350
TPYPYAPPVS TNLRISSPPS PSDMTTLSNG KPAAAEAQSL ETEKQDDSPT 
400
EPEKSEVEDS LPPNGSDSTS LPNDKPDAET EKQDDDSAEL DSSKVQDSSD 
450
KST
500