fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G33310 IAA13 auxin-induced protein 13 (.1.2.3)

>AT2G33310.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 516
NcoI C|CATGG 622
StyI C|C[AT][AT]GG 622


Click here to view TAIR data

>AT2G33310.1 length:741
ATGATTACTG AACTTGAGAT GGGGAAAGGT GAGAGTGAGC TTGAGCTTGG 
50
TCTAGGGCTG AGTCTTGGCG GTGGAACGGC GGCCAAGATT GGTAAATCAG 
100
GTGGTGGTGG CGCGTGGGGA GAGCGTGGAA GGCTTTTGAC GGCTAAGGAT 
150
TTTCCTTCTG TTGGTTCTAA ACGTGCTGCT GATTCTGCTT CTCATGCTGG 
200
TTCATCTCCT CCTCGTTCAA GTCAAGTTGT TGGATGGCCT CCTATAGGGT 
250
CACACAGGAT GAACAGTTTG GTTAATAACC AAGCTACAAA GTCAGCAAGA 
300
GAAGAAGAAG AAGCTGGTAA GAAGAAAGTG AAAGATGATG AACCTAAAGA 
350
TGTGACAAAG AAAGTGAATG GGAAAGTACA AGTTGGATTT ATTAAGGTGA 
400
ACATGGATGG AGTTGCTATA GGAAGAAAAG TGGATTTGAA TGCTCATTCT 
450
TCTTACGAGA ATTTGGCGCA AACATTGGAA GATATGTTCT TTCGCACTAA 
500
TCCGGGTACT GTCGGGTTAA CCAGTCAGTT CACTAAACCG TTGAGGCTTT 
550
TAGATGGATC GTCTGAGTTT GTACTTACTT ATGAAGATAA GGAAGGAGAT 
600
TGGATGCTTG TTGGTGATGT TCCATGGAGA ATGTTCATCA ACTCGGTGAA 
650
AAGGCTACGT GTGATGAAAA CCTCTGAAGC TAATGGACTC GCTGCACGAA 
700
ATCAAGAACC AAACGAGAGA CAGCGAAAGC AGCCGGTTTA G
750

>AT2G33310.1 longest ORF length:246
MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD 
50
FPSVGSKRAA DSASHAGSSP PRSSQVVGWP PIGSHRMNSL VNNQATKSAR 
100
EEEEAGKKKV KDDEPKDVTK KVNGKVQVGF IKVNMDGVAI GRKVDLNAHS 
150
SYENLAQTLE DMFFRTNPGT VGLTSQFTKP LRLLDGSSEF VLTYEDKEGD 
200
WMLVGDVPWR MFINSVKRLR VMKTSEANGL AARNQEPNER QRKQPV
250