fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G33310 IAA13 auxin-induced protein 13 (.1.2.3)

>AT2G33310.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 519
NcoI C|CATGG 625
StyI C|C[AT][AT]GG 625


Click here to view TAIR data

>AT2G33310.2 length:744
ATGATTACTG AACTTGAGAT GGGGAAAGGT GAGAGTGAGC TTGAGCTTGG 
50
TCTAGGGCTG AGTCTTGGCG GTGGAACGGC GGCCAAGATT GGTAAATCAG 
100
GTGGTGGTGG CGCGTGGGGA GAGCGTGGAA GGCTTTTGAC GGCTAAGGAT 
150
TTTCCTTCTG TTGGTTCTAA ACGTGCTGCT GATTCTGCTT CTCATGCTGG 
200
TTCATCTCCT CCTCGTTCAA GCAGTCAAGT TGTTGGATGG CCTCCTATAG 
250
GGTCACACAG GATGAACAGT TTGGTTAATA ACCAAGCTAC AAAGTCAGCA 
300
AGAGAAGAAG AAGAAGCTGG TAAGAAGAAA GTGAAAGATG ATGAACCTAA 
350
AGATGTGACA AAGAAAGTGA ATGGGAAAGT ACAAGTTGGA TTTATTAAGG 
400
TGAACATGGA TGGAGTTGCT ATAGGAAGAA AAGTGGATTT GAATGCTCAT 
450
TCTTCTTACG AGAATTTGGC GCAAACATTG GAAGATATGT TCTTTCGCAC 
500
TAATCCGGGT ACTGTCGGGT TAACCAGTCA GTTCACTAAA CCGTTGAGGC 
550
TTTTAGATGG ATCGTCTGAG TTTGTACTTA CTTATGAAGA TAAGGAAGGA 
600
GATTGGATGC TTGTTGGTGA TGTTCCATGG AGAATGTTCA TCAACTCGGT 
650
GAAAAGGCTA CGTGTGATGA AAACCTCTGA AGCTAATGGA CTCGCTGCAC 
700
GAAATCAAGA ACCAAACGAG AGACAGCGAA AGCAGCCGGT TTAG
750

>AT2G33310.2 longest ORF length:247
MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD 
50
FPSVGSKRAA DSASHAGSSP PRSSSQVVGW PPIGSHRMNS LVNNQATKSA 
100
REEEEAGKKK VKDDEPKDVT KKVNGKVQVG FIKVNMDGVA IGRKVDLNAH 
150
SSYENLAQTL EDMFFRTNPG TVGLTSQFTK PLRLLDGSSE FVLTYEDKEG 
200
DWMLVGDVPW RMFINSVKRL RVMKTSEANG LAARNQEPNE RQRKQPV
250