fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G33500 COL14 B-box type zinc finger protein with CCT domain (.1.2)

>AT2G33500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI
Name Recognition sequence Cut positions
BglII A|GATCT 158
HindIII A|AGCTT 88, 483
SpeI A|CTAGT 1003
StyI C|C[AT][AT]GG 896
XbaI T|CTAGA 1047
XhoI C|TCGAG 135


Click here to view TAIR data

>AT2G33500.1 length:1209
ATGGGTACTT CTACTACAGA GAGTGTGGTG GCGTGTGAAT TTTGCGGCGA 
50
GAGAACGGCG GTTCTGTTTT GTAGAGCCGA TACGGCGAAG CTTTGTTTGC 
100
CTTGTGACCA GCACGTGCAC TCGGCGAACC TTCTCTCGAG GAAGCATGTT 
150
CGTTCTCAGA TCTGTGATAA CTGTAGCAAA GAGCCGGTGT CCGTACGTTG 
200
CTTCACAGAT AATCTCGTAT TGTGTCAGGA GTGTGATTGG GATGTTCACG 
250
GAAGCTGTTC CTCCTCCGCG ACGCATGAAC GCTCCGCCGT GGAAGGGTTT 
300
TCAGGTTGTC CTTCGGTTTT GGAGCTTGCT GCTGTGTGGG GAATCGATTT 
350
AAAGGGTAAG AAGAAAGAAG ATGACGAAGA CGAATTGACT AAGAATTTTG 
400
GGATGGGGTT GGATTCGTGG GGTTCTGGAT CTAACATCGT TCAAGAACTG 
450
ATTGTTCCTT ATGATGTGTC TTGCAAAAAG CAAAGCTTTA GCTTTGGGAG 
500
GTCTAAGCAG GTAGTGTTTG AACAGCTTGA GTTACTGAAG AGAGGCTTCG 
550
TTGAAGGCGA AGGAGAGATT ATGGTTCCGG AGGGAATCAA TGGCGGAGGA 
600
AGCATTTCTC AGCCATCTCC GACGACGTCG TTTACTTCTT TGCTTATGTC 
650
TCAAAGTCTT TGTGGTAATG GTATGCAATG GAATGCTACT AATCATAGCA 
700
CTGGCCAGAA CACTCAGATA TGGGATTTTA ACTTGGGACA GTCGAGGAAC 
750
CCTGATGAAC CTAGTCCAGT CGAAACTAAA GGCTCTACTT TCACATTCAA 
800
CAACGTTACT CATCTCAAGA ACGATACCCG AACCACCAAT ATGAATGCTT 
850
TCAAAGAGAG TTACCAGCAG GAGGATTCCG TCCACTCAAC TTCTACCAAG 
900
GGACAGGAAA CATCTAAGAG CAACAATATT CCTGCTGCCA TTCACTCGCA 
950
TAAAAGTTCT AACGACTCCT GTGGCTTGCA TTGCACGGAA CATATTGCTA 
1000
TTACTAGTAA TAGAGCCACA AGATTGGTGG CGGTAACGAA TGCTGATCTA 
1050
GAGCAGATGG CACAGAACAG AGATAATGCT ATGCAGCGGT ACAAGGAAAA 
1100
GAAGAAAACG CGGAGATATG ATAAGACCAT AAGATATGAA ACGAGGAAGG 
1150
CGAGAGCCGA GACCAGGTTG CGTGTTAAGG GCAGATTTGT GAAAGCTACA 
1200
GATCCTTAG
1250

>AT2G33500.1 longest ORF length:402
MGTSTTESVV ACEFCGERTA VLFCRADTAK LCLPCDQHVH SANLLSRKHV 
50
RSQICDNCSK EPVSVRCFTD NLVLCQECDW DVHGSCSSSA THERSAVEGF 
100
SGCPSVLELA AVWGIDLKGK KKEDDEDELT KNFGMGLDSW GSGSNIVQEL 
150
IVPYDVSCKK QSFSFGRSKQ VVFEQLELLK RGFVEGEGEI MVPEGINGGG 
200
SISQPSPTTS FTSLLMSQSL CGNGMQWNAT NHSTGQNTQI WDFNLGQSRN 
250
PDEPSPVETK GSTFTFNNVT HLKNDTRTTN MNAFKESYQQ EDSVHSTSTK 
300
GQETSKSNNI PAAIHSHKSS NDSCGLHCTE HIAITSNRAT RLVAVTNADL 
350
EQMAQNRDNA MQRYKEKKKT RRYDKTIRYE TRKARAETRL RVKGRFVKAT 
400
DP
450