fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G33500 COL14 B-box type zinc finger protein with CCT domain (.1.2)

>AT2G33500.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI
Name Recognition sequence Cut positions
BglII A|GATCT 158
HindIII A|AGCTT 88, 483
SpeI A|CTAGT 1000
StyI C|C[AT][AT]GG 893
XbaI T|CTAGA 1044
XhoI C|TCGAG 135


Click here to view TAIR data

>AT2G33500.2 length:1206
ATGGGTACTT CTACTACAGA GAGTGTGGTG GCGTGTGAAT TTTGCGGCGA 
50
GAGAACGGCG GTTCTGTTTT GTAGAGCCGA TACGGCGAAG CTTTGTTTGC 
100
CTTGTGACCA GCACGTGCAC TCGGCGAACC TTCTCTCGAG GAAGCATGTT 
150
CGTTCTCAGA TCTGTGATAA CTGTAGCAAA GAGCCGGTGT CCGTACGTTG 
200
CTTCACAGAT AATCTCGTAT TGTGTCAGGA GTGTGATTGG GATGTTCACG 
250
GAAGCTGTTC CTCCTCCGCG ACGCATGAAC GCTCCGCCGT GGAAGGGTTT 
300
TCAGGTTGTC CTTCGGTTTT GGAGCTTGCT GCTGTGTGGG GAATCGATTT 
350
AAAGGGTAAG AAGAAAGAAG ATGACGAAGA CGAATTGACT AAGAATTTTG 
400
GGATGGGGTT GGATTCGTGG GGTTCTGGAT CTAACATCGT TCAAGAACTG 
450
ATTGTTCCTT ATGATGTGTC TTGCAAAAAG CAAAGCTTTA GCTTTGGGAG 
500
GTCTAAGCAG GTAGTGTTTG AACAGCTTGA GTTACTGAAG AGAGGCTTCG 
550
TTGAAGGCGA AGGAGAGATT ATGGTTCCGG AGGGAATCAA TGGCGGAGGA 
600
AGCATTTCTC AGCCATCTCC GACGACGTCG TTTACTTCTT TGCTTATGTC 
650
TCAAAGTCTT TGTGGTAATG GTATGCAATG GAATGCTACT AATCATAGCA 
700
CTGGCCAGAA CACTCAGATA TGGGATTTTA ACTTGGGACA GTCGAGGAAC 
750
CCTGATGAAC CTAGTCCAGT CGAAACTAAA GGCTCTACTT TCACATTCAA 
800
CAACGTTACT CATCTCAAGA ACGATACCCG AACCACCAAT ATGAATGCTT 
850
TCAAAGAGAG TTACCAGGAG GATTCCGTCC ACTCAACTTC TACCAAGGGA 
900
CAGGAAACAT CTAAGAGCAA CAATATTCCT GCTGCCATTC ACTCGCATAA 
950
AAGTTCTAAC GACTCCTGTG GCTTGCATTG CACGGAACAT ATTGCTATTA 
1000
CTAGTAATAG AGCCACAAGA TTGGTGGCGG TAACGAATGC TGATCTAGAG 
1050
CAGATGGCAC AGAACAGAGA TAATGCTATG CAGCGGTACA AGGAAAAGAA 
1100
GAAAACGCGG AGATATGATA AGACCATAAG ATATGAAACG AGGAAGGCGA 
1150
GAGCCGAGAC CAGGTTGCGT GTTAAGGGCA GATTTGTGAA AGCTACAGAT 
1200
CCTTAG
1250

>AT2G33500.2 longest ORF length:401
MGTSTTESVV ACEFCGERTA VLFCRADTAK LCLPCDQHVH SANLLSRKHV 
50
RSQICDNCSK EPVSVRCFTD NLVLCQECDW DVHGSCSSSA THERSAVEGF 
100
SGCPSVLELA AVWGIDLKGK KKEDDEDELT KNFGMGLDSW GSGSNIVQEL 
150
IVPYDVSCKK QSFSFGRSKQ VVFEQLELLK RGFVEGEGEI MVPEGINGGG 
200
SISQPSPTTS FTSLLMSQSL CGNGMQWNAT NHSTGQNTQI WDFNLGQSRN 
250
PDEPSPVETK GSTFTFNNVT HLKNDTRTTN MNAFKESYQE DSVHSTSTKG 
300
QETSKSNNIP AAIHSHKSSN DSCGLHCTEH IAITSNRATR LVAVTNADLE 
350
QMAQNRDNAM QRYKEKKKTR RYDKTIRYET RKARAETRLR VKGRFVKATD 
400
P
450