fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G33710 Integrase-type DNA-binding superfamily protein (.1.2)

>AT2G33710.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
HindIII A|AGCTT 364
PstI CTGCA|G 302
XhoI C|TCGAG 192


Click here to view TAIR data

>AT2G33710.1 length:657
ATGCATAGCG GGAAGAGACC TCTATCACCA GAATCAATGG CCGGAAATAG 
50
AGAAGAGAAA AAAGAGTTGT GTTGTTGCTC AACTTTGTCG GAATCTGATG 
100
TGTCTGATTT TGTCTCTGAA CTCACTGGTC AACCCATCCC ATCATCCATT 
150
GATGATCAAT CTTCGTCGCT TACTCTTCAA GAAAAAAGTA ACTCGAGGCA 
200
ACGAAACTAC AGAGGCGTGA GGCAAAGACC GTGGGGAAAA TGGGCGGCTG 
250
AGATTCGTGA CCCGAACAAG GCAGCTCGTG TGTGGCTTGG GACGTTCGAC 
300
ACTGCAGAAG AAGCCGCCTT AGCGTATGAT AAAGCTGCAT TTGAGTTTAG 
350
AGGTCACAAG GCCAAGCTTA ACTTCCCCGA GCATATTCGT GTCAACCCTA 
400
CTCAACTCTA TCCATCGCCC GCTACTTCCC ATGATCGCAT TATCGTGACA 
450
CCACCTAGTC CACCTCCACC AATTGCTCCT GACATACTTC TTGATCAATA 
500
TGGCCACTTT CAATCTCGAA GTAGTGATTC CAGTGCCAAC TTGTCCATGA 
550
ATATGCTGTC TTCTTCGTCT TCATCTTTGA ATCATCAAGG GCTAAGACCA 
600
AATTTGGAGG ATGGTGAAAA CGTGAAGAAC ATTAGTATCC ACAAACGACG 
650
AAAATAA
700

>AT2G33710.1 longest ORF length:218
MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI 
50
DDQSSSLTLQ EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD 
100
TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT 
150
PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP 
200
NLEDGENVKN ISIHKRRK
250