fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G33835 FES1 FRIGIDA-ESSENTIAL 1, Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT2G33835.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 898
EcoRI G|AATTC 369
HindIII A|AGCTT 104, 185, 246
PstI CTGCA|G 1370, 1406, 1529, 1622
SpeI A|CTAGT 382
XbaI T|CTAGA 438


Click here to view TAIR data

>AT2G33835.1 length:1764
ATGTCTGATT CCGACATGGA CATTGATGAT GATGAGGTCG AACAAAAGGT 
50
GCAAGTACAT ACAATTGTAA GAGAATCTGA ATTGTTTGAT AAACCACCAA 
100
TTCAAGCTTC CAATTCCCAC AACGATGTGA AGAGGCATTC TGTAACAACA 
150
CCTTTAGATG AGCAATCAAA AATCATAAAG GAGCAAGCTT TTGCTCAAGA 
200
TAATGGTACT TTACCAAGAT TTCCTGCTCC GGGTATACCG CCAAGAAGCT 
250
TTTTCACTGG CGGTGGTGGG AATGAACCAG AACAAAAACG TGCAGCTCTT 
300
CCCTGCAAAT TTTTTGCTAA AGGGTGGTGT TTCAATGGGG TGTCCTGCAA 
350
GTTTCTACAT GTGAAAGAGA ATTCAAATTG CACTAGTCAA CAACTGGCGG 
400
AAAATAGTAT GGCTGGAAAC GGTGGTATCC GGTCTGATCT AGAAAGAAGA 
450
ATTTTGGACA GCAGAGAAGG TGTAAGAGTT TCCCAGTTAA GCGAAAACGG 
500
TGTGACATCG TTGCCTACCA GAGAGGATAT ATCTTTCATG AATCCTCAGA 
550
GAGTTTTCTC CTCCATGTCT TTTGTGAATC CCCCAGGTTC TCAGAGAGTT 
600
TTCCCGTTCA ATAACGAGAT GCGCTTTATG CCTTCATTTG AAAACATTAG 
650
AAGAGAGAGT TTGAAGCAAA CGTATGGTGC TGATTTCACT GACAACAGGT 
700
CTCTAGTTAT TAATAACGCC AATTCCTTCG CATTGAGAAG CAGCTTTGTT 
750
CATGAGCATA GACCTTCTAT CAGTTCCTAT TTAAAAACAG ACATGGGATC 
800
TGCTGGACCA GCCTGGACAG GATCATTATC CAGTTCTGTT CCTATGAATG 
850
ATCGTGCTTC TACGGTGGGG GATTTTGAAA ATGGGAATAG TTTATCTGGA 
900
TCCGGATCAC TTCCAACGCT GCAAGGGGTA GCTGTTTCTT CTGATAAAGG 
950
CGCAGAAGCC AACACTACTA GCACTAAAAA GAAAGTTTCT TCAGATGACT 
1000
GGGAACCTTC TGAACCTTTT AAAGCATCTT TTACAATTCC ACCTTATATT 
1050
CTTCCCTCGT CTGATGCCCT CTACGATCCT TTCACGGATA TAGAGAATCT 
1100
AGGAGACAGA CCTCTTAATG ATTCATTGTC AAGTAAAGGA GAACATGCAC 
1150
GGAAAAGTTC CTGCCAGCAG AAAGATGGTG ATTCTGCTAG TGGTCCCCAA 
1200
GCACGGGATT GCAAGAATGA TGATAAAAGC AGTTCATGCA GTCAAAATCA 
1250
ACACCAAGAA ACCGTGGCAA GGAGTTTGGA AGCACATGGA GTAGTGGAAG 
1300
GGGTGGCTAC GTCAGTGGTT GATCAAAATG ATACAGCAAC GCCTAGCAAA 
1350
GAGATTTCTT CGGCTACGGC TGCAGAGAAT AGAGTTGTTT TGAAAAGAAT 
1400
CAAACCTGCA GGGCATGATT CTTGGCATAG AAGTGATGGG TCTTCATATA 
1450
AAAAGACAAA GAAATCAGAT GAGATAGATG GTGAAGTGAG GTCAGATGCA 
1500
GGAATGAAAG TAATGAGACT ATTCCGGACT GCAGTTGTGG AAACCATTAA 
1550
AGAAATGTTG AAACCGTTGT GGCGTGAGGG TCGTCTAACT AAAGACGTGC 
1600
ATAACATGAT AGTTAAAAAA GCTGCAGAAA AGGTAGTCGG CGCCGCTGTC 
1650
CAGTTTCATC AGGTGCCAAC TGACACAGAA TCAGTTGATC AATATCTTGG 
1700
TTTGTCTGGA ACCAGAATTG TGAAACTTGT CGAGGGGTAT GTCGAAAAGT 
1750
ATGGTAAACC CTGA
1800

>AT2G33835.1 longest ORF length:587
MSDSDMDIDD DEVEQKVQVH TIVRESELFD KPPIQASNSH NDVKRHSVTT 
50
PLDEQSKIIK EQAFAQDNGT LPRFPAPGIP PRSFFTGGGG NEPEQKRAAL 
100
PCKFFAKGWC FNGVSCKFLH VKENSNCTSQ QLAENSMAGN GGIRSDLERR 
150
ILDSREGVRV SQLSENGVTS LPTREDISFM NPQRVFSSMS FVNPPGSQRV 
200
FPFNNEMRFM PSFENIRRES LKQTYGADFT DNRSLVINNA NSFALRSSFV 
250
HEHRPSISSY LKTDMGSAGP AWTGSLSSSV PMNDRASTVG DFENGNSLSG 
300
SGSLPTLQGV AVSSDKGAEA NTTSTKKKVS SDDWEPSEPF KASFTIPPYI 
350
LPSSDALYDP FTDIENLGDR PLNDSLSSKG EHARKSSCQQ KDGDSASGPQ 
400
ARDCKNDDKS SSCSQNQHQE TVARSLEAHG VVEGVATSVV DQNDTATPSK 
450
EISSATAAEN RVVLKRIKPA GHDSWHRSDG SSYKKTKKSD EIDGEVRSDA 
500
GMKVMRLFRT AVVETIKEML KPLWREGRLT KDVHNMIVKK AAEKVVGAAV 
550
QFHQVPTDTE SVDQYLGLSG TRIVKLVEGY VEKYGKP
600