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| Locus | Common name | Short description |
| AT2G33880 | WOX9A, STIP, WOX9, HB-3 | WUSCHEL related homeobox 9A, WUSCHEL-RELATED HOMEOBOX 9, STIMPY, homeobox-3 (.1) |
>AT2G33880.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AvaI, AvrII, BaeI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstEII, BstNI, BstXI, BstYI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 1054 |
| AciI | C|CGC | 343, 389, 395, 401, 1053 |
| AflIII | A|CPuPyGT | 652 |
| AluI | AG|CT | 261, 811, 933, 984, 995 |
| AseI | AT|TAAT | 1048 |
| AvaII | G|G[AT]CC | 929, 1002 |
| BalI | TGG|CCA | 22 |
| BanII | GPuGCPy|C | 257, 996 |
| BfaI | C|TAG | 1132 |
| BlpI | GC|TNAGC | 260 |
| BsaHI | GPu|CGPyC | 1087 |
| BsaJI | C|CNNGG | 1055 |
| BsaWI | [AT]|CCGG[AT] | 534, 616, 658 |
| BsiHKAI | G[AT]GC[AT]|C | 996 |
| BslI | CCNNNNN|NNGG | 58, 604 |
| Bsp1286I | G[GAT]GC[CAT]|C | 257, 996 |
| BspHI | T|CATGA | 680 |
| BsrFI | Pu|CCGGPy | 540, 642 |
| BsrI | ACTGGN| | 20, 305 |
| BssKI | |CCNGG | 214, 554 |
| BstBI | TT|CGAA | 9 |
| BstF5I | GGATGNN| | 128, 219, 525, 753, 1021 |
| BstUI | CG|CG | 1054 |
| BtgI | C|CPuPyGG | 1055 |
| Cfr10I | [AG]|CCGG[TC] | 540, 642 |
| DdeI | C|TNAG | 259, 669, 778, 998 |
| DpnI | GA-CH3|TC | 105, 241, 676, 1129 |
| DpnII | |GATC | 105, 241, 676, 1129 |
| EaeI | Py|GGCCPu | 22, 276 |
| Fnu4HI | GC|NGC | 392, 398 |
| HaeIII | GG|CC | 21, 275 |
| HinfI | G|ANTC | 143, 167, 185, 224, 661, 776 |
| HpaII | C|CGG | 213, 533, 539, 554, 615, 641, 657 |
| Hpy188I | TCN|GA | 188, 568, 779, 927, 1043, 1127 |
| Hpy99I | CG[AT]CG| | 1088 |
| HpyCH4III | ACN|GT | 316, 564, 588, 685, 912, 1004 |
| HpyCH4IV | A|CGT | 294, 650 |
| HpyCH4V | TG|CA | 762, 1021 |
| MboI | |GATC | 105, 241, 676, 1129 |
| MscI | TGG|CCA | 22 |
| MseI | T|TAA | 207, 1047 |
| MslI | CAPyNN|NNPuTG | 725 |
| MspA1I | C[AC]G|C[GT]G | 1055 |
| MspI | C|CGG | 213, 533, 539, 554, 615, 641, 657 |
| MwoI | GCNNNNN|NNGC | 392 |
| N.BstNBI | GAGTCNNNN|N | 148 |
| NciI | CC|[CG]GG | 214, 554 |
| NlaIII | CATG| | 28, 65, 679, 847 |
| NlaIV | GGN|NCC | 308, 537, 645, 1114 |
| NsiI | ATGCA|T | 1022 |
| NspI | PuCATG|Py | 29 |
| RsaI | GT|AC | 654, 1120 |
| SacI | GAGCT|C | 996 |
| SacII | CCGC|GG | 1055 |
| Sau3AI | |GATC | 105, 241, 676, 1129 |
| Sau96I | G|GNCC | 929, 1002 |
| ScrFI | CC|NGG | 214, 554 |
| SmlI | C|TPyPuAG | 723 |
| Taqƒ¿I | T|CGA | 8 |
| TfiI | G|A[AT]TC | 167, 185, 224 |
| TseI | G|C[AT]GC | 392, 398 |
| Tsp45I | |GT[CG]AC | 1071 |
| Tsp509I | |AATT | 600, 1049 |
| TspRI | NNCA[CG]TGNN| | 20, 565 |
| XcmI | CCANNNNN|NNNNTGG | 163 |
Click here to view TAIR data
>AT2G33880.1 length:1137
ATGGCTTCTT CGAATAGACA CTGGCCAAGC ATGTTCAAGT CCAAACCTCA | 50 |
TCCCCATCAA TGGCAACATG ACATCAACTC TCCTCTCTTG CCTTCTGCTT | 100 |
CTCACCGATC TTCTCCTTTC TCTTCAGGAT GTGAAGTGGA GAGGAGTCCA | 150 |
GAGCCAAAAC CAAGATGGAA TCCAAAGCCA GAGCAGATTC GGATACTTGA | 200 |
AGCAATCTTT AACTCCGGGA TGGTGAATCC TCCAAGAGAG GAGATCAGGA | 250 |
GGATTAGGGC TCAGCTTCAA GAATACGGCC AAGTCGGTGA TGCTAACGTC | 300 |
TTCTACTGGT TCCAAAACCG TAAGTCCCGT AGTAAACACA AACTCCGCCT | 350 |
CCTCCACAAC CACTCCAAAC ACTCTCTCCC TCAAACGCAA CCGCAGCCGC | 400 |
AGCCGCAACC TTCGGCTTCC TCTTCCTCTT CCTCCTCCTC TTCCTCCTCC | 450 |
AAATCCACCA AACCCCGAAA AAGCAAGAAC AAGAACAACA CTAATCTCTC | 500 |
TTTGGGTGGT AGTCAAATGA TGGGGATGTT TCCACCGGAA CCGGCGTTTC | 550 |
TCTTCCCGGT CTCCACTGTC GGAGGGTTTG AAGGTATCAC CGTCTCATCC | 600 |
CAATTAGGGT TTCTCTCCGG TGATATGATT GAGCAACAAA AACCGGCTCC | 650 |
AACGTGTACC GGACTCCTGC TGAGTGAGAT CATGAACGGT AGTGTGAGTT | 700 |
ATGGAACTCA TCATCAACAA CACTTGAGTG AGAAAGAAGT TGAAGAAATG | 750 |
AGGATGAAGA TGTTGCAACA GCCACAGACT CAGATTTGTT ACGCTACCAC | 800 |
TAATCATCAA ATAGCTTCTT ACAACAACAA CAACAACAAC AATAACATCA | 850 |
TGCTTCATAT TCCTCCCACT ACTTCTACTG CCACCACTAT TACTACTTCG | 900 |
CATTCTCTCG CTACTGTCCC ATCAACTTCG GACCAGCTTC AAGTTCAAGC | 950 |
GGACGCACGA ATAAGAGTTT TCATCAATGA AATGGAGCTT GAAGTGAGCT | 1000 |
CAGGACCGTT CAATGTGAGG GATGCATTTG GGGAAGAGGT TGTTCTGATT | 1050 |
AATTCCGCGG GTCAGCCCAT TGTCACCGAT GAATATGGCG TCGCTCTTCA | 1100 |
CCCTCTTCAA CACGGAGCCT CGTACTATCT GATCTAG | 1150 |
>AT2G33880.1 longest ORF length:378
MASSNRHWPS MFKSKPHPHQ WQHDINSPLL PSASHRSSPF SSGCEVERSP | 50 |
EPKPRWNPKP EQIRILEAIF NSGMVNPPRE EIRRIRAQLQ EYGQVGDANV | 100 |
FYWFQNRKSR SKHKLRLLHN HSKHSLPQTQ PQPQPQPSAS SSSSSSSSSS | 150 |
KSTKPRKSKN KNNTNLSLGG SQMMGMFPPE PAFLFPVSTV GGFEGITVSS | 200 |
QLGFLSGDMI EQQKPAPTCT GLLLSEIMNG SVSYGTHHQQ HLSEKEVEEM | 250 |
RMKMLQQPQT QICYATTNHQ IASYNNNNNN NNIMLHIPPT TSTATTITTS | 300 |
HSLATVPSTS DQLQVQADAR IRVFINEMEL EVSSGPFNVR DAFGEEVVLI | 350 |
NSAGQPIVTD EYGVALHPLQ HGASYYLI | 400 |