Locus |
Common name |
Short description |
AT2G34140 |
AtDof2. 3 |
Dof-type zinc finger DNA-binding family protein (.1) |
>AT2G34140.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, ClaI, DdeI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SfaNI, SfcI, SfiI, SmaI, SnaBI, SpeI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, Tsp509I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccIII(BspMII)
| T|CCGGA |
159, 293 |
AciI
| C|CGC |
89, 276, 429, 435 |
AclI
| AA|CGTT |
229, 298 |
AluI
| AG|CT |
390, 439 |
ApaLI
| G|TGCAC |
287 |
AvaII
| G|G[AT]CC |
274 |
BanI
| G|GPyPuCC |
310 |
BsaBI
| GATNN|NNATC |
126 |
BsaHI
| GPu|CGPyC |
310 |
BsaWI
| [AT]|CCGG[AT] |
159, 293, 482 |
BsiEI
| CGPuPy|CG |
146, 315 |
BsiHKAI
| G[AT]GC[AT]|C |
287 |
BslI
| CCNNNNN|NNGG |
319, 475 |
Bsp1286I
| G[GAT]GC[CAT]|C |
287 |
BspEI
| T|CCGGA |
159, 293 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
310 |
BsrFI
| Pu|CCGGPy |
280, 313 |
BsrI
| ACTGGN| |
272 |
BssKI
| |CCNGG |
336 |
BstNI
| CC|[AT]GG |
336 |
BstYI
| Pu|GATCPy |
138 |
Cac8I
| GCN|NGC |
404, 426 |
Cfr10I
| [AG]|CCGG[TC] |
280, 313 |
DpnI
| GA-CH3|TC |
120, 137, 166 |
DpnII
| |GATC |
120, 137, 166 |
EaeI
| Py|GGCCPu |
146 |
EagI
| C|GGCCG |
146 |
Fnu4HI
| GC|NGC |
259, 422, 429, 435, 476 |
HaeII
| PuGCGC|Py |
310 |
HaeIII
| GG|CC |
145 |
HhaI
| GCG|C |
309 |
HinP1I
| G|CGC |
309 |
HinfI
| G|ANTC |
5, 12 |
HpaII
| C|CGG |
92, 158, 279, 292, 312, 454, 481 |
Hpy188I
| TCN|GA |
135, 140, 320, 492 |
Hpy99I
| CG[AT]CG| |
305, 318, 494 |
HpyCH4III
| ACN|GT |
265, 445, 496 |
HpyCH4IV
| A|CGT |
228, 297 |
HpyCH4V
| TG|CA |
46, 185, 286 |
KasI
| G|GCGCC |
310 |
MboI
| |GATC |
120, 137, 166 |
MseI
| T|TAA |
24, 51, 231 |
MspI
| C|CGG |
92, 158, 279, 292, 312, 454, 481 |
MwoI
| GCNNNNN|NNGC |
111, 285, 435 |
NarI
| GG|CGCC |
310 |
NlaIII
| CATG| |
174, 193, 425, 458, 469 |
NlaIV
| GGN|NCC |
310, 479 |
NspI
| PuCATG|Py |
175, 426 |
PsiI
| TTA|TAA |
395 |
PspGI
| |CC[AT]GG |
336 |
Sau3AI
| |GATC |
120, 137, 166 |
Sau96I
| G|GNCC |
274 |
ScrFI
| CC|NGG |
336 |
SexAI
| A|CC[AT]GGT |
337 |
SfoI
| GGC|GCC |
310 |
SgrAI
| CPu|CCGGPyG |
281 |
SmlI
| C|TPyPuAG |
8, 17 |
SphI
| GCATG|C |
426 |
Taqƒ¿I
| T|CGA |
58, 241, 387 |
TfiI
| G|A[AT]TC |
12 |
TseI
| G|C[AT]GC |
259, 422, 432, 438 |
Click here to view TAIR data
>AT2G34140.1 length:513
ATGGCGACTC AAGATTCTCA AGGGATTAAA CTCTTTGGCA AAACTATTGC | 50 |
ATTTAACACT CGAACAATAA AAAATGAAGA AGAGACACAC CCGCCGGAGC | 100 |
AAGAAGCCAC AATAGCCGTT AGATCATCAT CATCATCGGA TCTGACGGCC | 150 |
GAGAAGCGTC CGGATAAGAT CATAGCATGT CCAAGATGCA AGAGCATGGA | 200 |
GACAAAGTTC TGTTACTTCA ACAACTACAA CGTTAATCAG CCTCGACACT | 250 |
TTTGTAAAGG CTGCCACCGT TACTGGACCG CCGGTGGTGC ACTCCGGAAC | 300 |
GTTCCCGTCG GCGCCGGTCG TCGGAAGTCC AAACCACCTG GTCGTGTCGT | 350 |
GGTTGGTATG CTTGGAGATG GAAATGGTGT TCGCCAAGTC GAGCTTATAA | 400 |
ATGGCTTGCT CGTTGAGGAG TGGCAGCATG CCGCAGCCGC AGCTCACGGT | 450 |
AGTTTCCGGC ATGATTTTCC CATGAAGCGG CTCCGGTGTT ACTCCGACGG | 500 |
TCAATCGTGC TGA | 550 |
>AT2G34140.1 longest ORF length:170
MATQDSQGIK LFGKTIAFNT RTIKNEEETH PPEQEATIAV RSSSSSDLTA | 50 |
EKRPDKIIAC PRCKSMETKF CYFNNYNVNQ PRHFCKGCHR YWTAGGALRN | 100 |
VPVGAGRRKS KPPGRVVVGM LGDGNGVRQV ELINGLLVEE WQHAAAAAHG | 150 |
SFRHDFPMKR LRCYSDGQSC | 200 |
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