fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G34720 NF-YA4 "nuclear factor Y, subunit A4", nuclear factor Y, subunit A4 (.1)

>AT2G34720.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 589
HpaI GTT|AAC 304
NcoI C|CATGG 140, 321
SacI GAGCT|C 19
SmaI CCC|GGG 347
StyI C|C[AT][AT]GG 140, 321


Click here to view TAIR data

>AT2G34720.1 length:597
ATGACTTCTT CAGTACATGA GCTCTCTGAT AACAATGAAA GTCATGCGAA 
50
GAAAGAACGT CCAGATTCCC AAACCCGACC ACAGGTTCCT TCAGGACGAA 
100
GTTCGGAATC TATTGATACA AACTCTGTCT ACTCAGAGCC CATGGCACAT 
150
GGATTATACC CGTATCCAGA TCCTTACTAC AGAAGCGTCT TTGCACAGCA 
200
AGCGTATCTT CCACATCCCT ATCCTGGGGT CCAATTGCAG TTAATGGGAA 
250
TGCAGCAGCC AGGAGTTCCA TTGCAATGTG ATGCAGTCGA GGAACCTGTT 
300
TTTGTTAACG CAAAGCAATA CCATGGTATA CTCAGGCGCA GGCAATCCCG 
350
GGCAAAACTT GAGGCACGAA ATAGAGCCAT CAAAGCAAAA AAGCCATACA 
400
TGCATGAATC TCGGCATTTA CATGCGATAA GACGGCCAAG AGGATGTGGT 
450
GGCCGGTTTC TCAATGCCAA GAAGGAAAAT GGAGACCACA AGGAGGAGGA 
500
GGAGGCAACC TCTGATGAGA ACACTTCAGA AGCAAGTTCC AGCCTCAGGT 
550
CCGAGAAATT AGCTATGGCT ACTTCTGGTC CTAATGGTAG ATCTTGA
600

>AT2G34720.1 longest ORF length:198
MTSSVHELSD NNESHAKKER PDSQTRPQVP SGRSSESIDT NSVYSEPMAH 
50
GLYPYPDPYY RSVFAQQAYL PHPYPGVQLQ LMGMQQPGVP LQCDAVEEPV 
100
FVNAKQYHGI LRRRQSRAKL EARNRAIKAK KPYMHESRHL HAIRRPRGCG 
150
GRFLNAKKEN GDHKEEEEAT SDENTSEASS SLRSEKLAMA TSGPNGRS
200