Locus |
Common name |
Short description |
AT2G34720 |
NF-YA4 |
"nuclear factor Y, subunit A4", nuclear factor Y, subunit A4 (.1) |
>AT2G34720.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
589 |
HpaI
| GTT|AAC |
304 |
NcoI
| C|CATGG |
140, 321 |
SacI
| GAGCT|C |
19 |
SmaI
| CCC|GGG |
347 |
StyI
| C|C[AT][AT]GG |
140, 321 |
Click here to view TAIR data
>AT2G34720.1 length:597
ATGACTTCTT CAGTACATGA GCTCTCTGAT AACAATGAAA GTCATGCGAA | 50 |
GAAAGAACGT CCAGATTCCC AAACCCGACC ACAGGTTCCT TCAGGACGAA | 100 |
GTTCGGAATC TATTGATACA AACTCTGTCT ACTCAGAGCC CATGGCACAT | 150 |
GGATTATACC CGTATCCAGA TCCTTACTAC AGAAGCGTCT TTGCACAGCA | 200 |
AGCGTATCTT CCACATCCCT ATCCTGGGGT CCAATTGCAG TTAATGGGAA | 250 |
TGCAGCAGCC AGGAGTTCCA TTGCAATGTG ATGCAGTCGA GGAACCTGTT | 300 |
TTTGTTAACG CAAAGCAATA CCATGGTATA CTCAGGCGCA GGCAATCCCG | 350 |
GGCAAAACTT GAGGCACGAA ATAGAGCCAT CAAAGCAAAA AAGCCATACA | 400 |
TGCATGAATC TCGGCATTTA CATGCGATAA GACGGCCAAG AGGATGTGGT | 450 |
GGCCGGTTTC TCAATGCCAA GAAGGAAAAT GGAGACCACA AGGAGGAGGA | 500 |
GGAGGCAACC TCTGATGAGA ACACTTCAGA AGCAAGTTCC AGCCTCAGGT | 550 |
CCGAGAAATT AGCTATGGCT ACTTCTGGTC CTAATGGTAG ATCTTGA | 600 |
>AT2G34720.1 longest ORF length:198
MTSSVHELSD NNESHAKKER PDSQTRPQVP SGRSSESIDT NSVYSEPMAH | 50 |
GLYPYPDPYY RSVFAQQAYL PHPYPGVQLQ LMGMQQPGVP LQCDAVEEPV | 100 |
FVNAKQYHGI LRRRQSRAKL EARNRAIKAK KPYMHESRHL HAIRRPRGCG | 150 |
GRFLNAKKEN GDHKEEEEAT SDENTSEASS SLRSEKLAMA TSGPNGRS | 200 |
|