fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G34820 bHLH053 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT2G34820.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 789
HpaI GTT|AAC 307
KpnI GGTAC|C 768
NcoI C|CATGG 5
SacI GAGCT|C 553
StyI C|C[AT][AT]GG 5
XhoI C|TCGAG 833


Click here to view TAIR data

>AT2G34820.1 length:876
ATGTCCATGG ATTGCTTAAG CTACTTCTTT AACTACGATC CTCCTGTCCA 
50
GCTCCAGGAT TGCTTTATTC CCGAGATGGA TATGATTATC CCTGAAACCG 
100
ATAGTTTCTT CTTCCAATCT CAACCGCAAC TGGAGTTTCA TCAGCCATTG 
150
TTTCAAGAAG AAGCTCCTTC ACAGACCCAC TTTGACCCTT TCTGCGACCA 
200
GTTTCTTTCT CCGCAAGAAA TCTTTCTCCC TAACCCTAAA AACGAAATCT 
250
TCAACGAAAC ACACGACCTC GATTTCTTTC TCCCCACGCC AAAACGCCAG 
300
AGACTTGTTA ACTCCAGCTA CAATTGTAAC ACTCAAAACC ATTTCCAGAG 
350
CCGTAACCCG AATTTCTTCG ACCCTTTCGG CGACACTGAT TTCGTTCCAG 
400
AATCTTGTAC CTTCCAGGAG TTTCGAGTTC CGGATTTCTC TTTAGCTTTC 
450
AAGGTAGGCC GGGGAGATCA AGATGACTCA AAGAAACCGA CGCTTTCATC 
500
TCAGAGCATC GCGGCTAGAG GGAGGAGAAG AAGAATTGCA GAGAAGACTC 
550
ACGAGCTCGG AAAACTCATC CCCGGTGGCA ATAAACTTAA CACCGCCGAG 
600
ATGTTCCAAG CCGCCGCTAA GTATGTCAAG TTTTTGCAGA GTCAAGTTGG 
650
GATTCTCCAA CTGATGCAGA CCACAAAGAA GGGTAGCTCT AATGTGCAAA 
700
TGGAAACTCA GTATTTGCTT GAATCGCAAG CAATCCAGGA GAAGTTATCA 
750
ACAGAGGAAG TGTGTTTGGT ACCGTGTGAA ATGGTTCAAG ATCTAACAAC 
800
TGAAGAAACC ATTTGCAGAA CCCCGAATAT TTCTCGAGAA ATCAACAAGT 
850
TACTGTCTAA ACATCTGGCT AACTAG
900

>AT2G34820.1 longest ORF length:291
MSMDCLSYFF NYDPPVQLQD CFIPEMDMII PETDSFFFQS QPQLEFHQPL 
50
FQEEAPSQTH FDPFCDQFLS PQEIFLPNPK NEIFNETHDL DFFLPTPKRQ 
100
RLVNSSYNCN TQNHFQSRNP NFFDPFGDTD FVPESCTFQE FRVPDFSLAF 
150
KVGRGDQDDS KKPTLSSQSI AARGRRRRIA EKTHELGKLI PGGNKLNTAE 
200
MFQAAAKYVK FLQSQVGILQ LMQTTKKGSS NVQMETQYLL ESQAIQEKLS 
250
TEEVCLVPCE MVQDLTTEET ICRTPNISRE INKLLSKHLA N
300