fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G35310 Transcriptional factor B3 family protein (.1)

>AT2G35310.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 589
HindIII A|AGCTT 126, 750
NdeI CA|TATG 658
PstI CTGCA|G 560
PvuII CAG|CTG 443
SacI GAGCT|C 142
StyI C|C[AT][AT]GG 266


Click here to view TAIR data

>AT2G35310.1 length:867
ATGGCTAGAA ACAGTGACAA TGATATGTGC AAAGAAGAAC GGAAGAGAGA 
50
GAGCTTCTTC AAGGTTCTAC AGAGAGTTGA TATTTCTTCT GAGAACATGA 
100
GAGCACTTCC TTACGACTTT GTGAGAAGCT TCTCCAACAA TGAGCTCTCT 
150
CGTAAGATGA AGATAAAAGC TCGATGGGGA AGTTCTTGGG AAGTAGAAAT 
200
CTGCAAAAAT CCAAGATTCT ATTTCATGGA GAAATCCGGA TGGGAGAAGT 
250
TTGTGAGTGA CAATGCCTTG GGAGCCAGTG AGTTTCTTAC CTTCACTCAC 
300
AAAGGGAATA TGCGTTTTAC AGTGAACATC TTCATGCAAG ATGGCAAGGA 
350
GATGCTACAG CCTCCACAAT CCATGTCCTT CATGGCTTCT TCTAGGCCAC 
400
CTAAAAGAGA ACAAGGAATA CCTTCTCTTG CCACGACAAT AGCAGCTGAA 
450
TCTAATGGAG GAGGGAACTA CAAAAGGAAG CTCAACTTTG AGAAGAAGAA 
500
AGCTGAGGAA TCTCACAATT CCAAGAGGAC CGATAAAGTC TTTAGTGTCC 
550
AGAGAGAATC TGCAGGTGCC TCTTCATCTT CTGTTGCAGA ATTCTCCATG 
600
TTTATCAAAA AATCATACCT CATCTACATG TGGTTCCCGA AATCTGTTCA 
650
AAGTATTCAT ATGCCGAAGC AGAGAACGAT TTTCAAGATA CATCACCCAA 
700
ATATGAAGAA GTCATGGAAT GTGGTTTACG TGGTGTCAGG GACGAAATCA 
750
AGCTTCTCTG CTGGATGGAA AGGTTTGGCT CAAGAATATC CTCTAGCAGT 
800
TGGAGACACT TGCAAGTTTT CATTCATCAA ACAACACGAG CTGATTCTCT 
850
TTGTCTCAAA ACCCTAA
900

>AT2G35310.1 longest ORF length:288
MARNSDNDMC KEERKRESFF KVLQRVDISS ENMRALPYDF VRSFSNNELS 
50
RKMKIKARWG SSWEVEICKN PRFYFMEKSG WEKFVSDNAL GASEFLTFTH 
100
KGNMRFTVNI FMQDGKEMLQ PPQSMSFMAS SRPPKREQGI PSLATTIAAE 
150
SNGGGNYKRK LNFEKKKAEE SHNSKRTDKV FSVQRESAGA SSSSVAEFSM 
200
FIKKSYLIYM WFPKSVQSIH MPKQRTIFKI HHPNMKKSWN VVYVVSGTKS 
250
SFSAGWKGLA QEYPLAVGDT CKFSFIKQHE LILFVSKP
300