fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G35550 BPC7, BBR/BPC7, ATBPC7 basic pentacysteine 7 (.1.2.3.4)

>AT2G35550.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrFI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaII, HphI, Hpy188I, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MspI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AccII(FnuDII) CG|CG 95
AciI C|CGC 407
AluI AG|CT 87, 124, 391, 512, 664, 708
ApoI Pu|AATTPy 138
BanI G|GPyPuCC 297
BanII GPuGCPy|C 665
BfaI C|TAG 122, 453
BsiHKAI G[AT]GC[AT]|C 648, 665
BsiWI C|GTACG 202
BslI CCNNNNN|NNGG 285
Bsp1286I G[GAT]GC[CAT]|C 648, 665
BspT107I(HgiCI) G|G[TC][AG]CC 297
BsrDI GCAATGNN| 694
BsrGI T|GTACA 553
BssKI |CCNGG 660
BstBI TT|CGAA 387
BstNI CC|[AT]GG 660
BstUI CG|CG 95
Cac8I GCN|NGC 197, 723
DdeI C|TNAG 191, 268
DpnI GA-CH3|TC 66, 106, 260, 758
DpnII |GATC 66, 106, 260, 758
EcoNI CCTNN|NNNAGG 285
EcoRI G|AATTC 138
Fnu4HI GC|NGC 89
HaeIII GG|CC 775
HincII GTPy|PuAC 22
HindIII A|AGCTT 392, 513
HinfI G|ANTC 9, 189, 333, 485
HpaI GTT|AAC 22
HpyCH4III ACN|GT 354, 784
HpyCH4IV A|CGT 203, 472
HpyCH4V TG|CA 90, 148, 673
MboI |GATC 66, 106, 260, 758
MseI T|TAA 21, 705
MwoI GCNNNNN|NNGC 177, 407, 672, 723
NlaIII CATG| 228, 549, 586, 606, 643
NlaIV GGN|NCC 273, 297, 531
PspGI |CC[AT]GG 660
RsaI GT|AC 201, 552, 612, 786
SacI GAGCT|C 665
Sau3AI |GATC 66, 106, 260, 758
Sau96I G|GNCC 775
ScrFI CC|NGG 660
SmlI C|TPyPuAG 510, 763
Taqƒ¿I T|CGA 386, 626
TfiI G|A[AT]TC 9, 333, 485
TseI G|C[AT]GC 89
Tsp45I |GT[CG]AC 801
Tsp509I |AATT 137
TspRI NNCA[CG]TGNN| 117


Click here to view TAIR data

>AT2G35550.1 length:816
ATGGGTCTTG ATTCTTCTTT CGTTAACTCT TCTGGGTTTG CCGATTTTCA 
50
ATCAAACAAT CTTGAAAGAT CAAATCTTTT CCTCTACGAG CTGCAACGCG 
100
AAGGTGTGAT CTTTCCACTG AAACTAGCTA TCAAGATGAA TTCATTTCCT 
150
GCACAAAACC TTATGCTATC TGCTACAAAC GCAAACAAGG ACTCAGGCTT 
200
GCGTACGTCT AATGCTCATT GGTTACATTC ATGTATCGCC GTTCCAAAGA 
250
CCACAGGCAT TGATCTTTCT CAGGAACCTC CTGCTGAAGG TGTGATGGTG 
300
CCTCAATCTC ATTTGTTTCC TCCTCCTATT AGAGATTCCA GAAACGATAC 
350
TGAAACTGTG AAACAGAAGT CCGTAAATCA GTCTCCTTCG AAAGCTTTGA 
400
AGCCAAAACC GCAAAGGAAG AAACGCTCTG TATCCAACAA GTCAAAGAAA 
450
ACACCTAGCA TACCAGAAAC AAAACGTGAG AAAAAGAATC TGGACATCAA 
500
CATTGACATC TCAAGCTTTG ATACTTCTGG GGTTCCTCCT CCTGTATGTT 
550
CATGTACAGG CGTTTCAAGG GTTTGCTACA AATGGGGCAT GGGCGGTTGG 
600
CAATCCTCAT GTTGTACCAT CAGCATATCG ACATACCCAC TACCCATGAG 
650
CACAACAAGA CCTGGAGCTC GTCTTGCAGG AAGAAAAATG AGCAATGGTG 
700
CTTATGTTAA GCTCCTTGCG AGGCTTGCGG ACGAAGGCTA TGACCTCTCT 
750
CACCCTCTTG ATCTCAAGAA CCATTGGGCC AGACACGGTA CTAACAAGTT 
800
TGTGACCATC AAGTAG
850

>AT2G35550.1 longest ORF length:271
MGLDSSFVNS SGFADFQSNN LERSNLFLYE LQREGVIFPL KLAIKMNSFP 
50
AQNLMLSATN ANKDSGLRTS NAHWLHSCIA VPKTTGIDLS QEPPAEGVMV 
100
PQSHLFPPPI RDSRNDTETV KQKSVNQSPS KALKPKPQRK KRSVSNKSKK 
150
TPSIPETKRE KKNLDINIDI SSFDTSGVPP PVCSCTGVSR VCYKWGMGGW 
200
QSSCCTISIS TYPLPMSTTR PGARLAGRKM SNGAYVKLLA RLADEGYDLS 
250
HPLDLKNHWA RHGTNKFVTI K
300