fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G35550 BPC7, BBR/BPC7, ATBPC7 basic pentacysteine 7 (.1.2.3.4)

>AT2G35550.2 CDS map

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Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrFI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoO109I, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HpaII, HphI, Hpy188I, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MspI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TseI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AciI C|CGC 272
AluI AG|CT 256, 377, 529, 573
ApoI Pu|AATTPy 3
BanI G|GPyPuCC 162
BanII GPuGCPy|C 530
BfaI C|TAG 318
BsiHKAI G[AT]GC[AT]|C 513, 530
BsiWI C|GTACG 67
BslI CCNNNNN|NNGG 150
Bsp1286I G[GAT]GC[CAT]|C 513, 530
BspT107I(HgiCI) G|G[TC][AG]CC 162
BsrDI GCAATGNN| 559
BsrGI T|GTACA 418
BssKI |CCNGG 525
BstBI TT|CGAA 252
BstNI CC|[AT]GG 525
Cac8I GCN|NGC 62, 588
DdeI C|TNAG 56, 133
DpnI GA-CH3|TC 125, 623
DpnII |GATC 125, 623
EcoNI CCTNN|NNNAGG 150
EcoRI G|AATTC 3
HaeIII GG|CC 640
HindIII A|AGCTT 257, 378
HinfI G|ANTC 54, 198, 350
HpyCH4III ACN|GT 219, 649
HpyCH4IV A|CGT 68, 337
HpyCH4V TG|CA 13, 538
MboI |GATC 125, 623
MseI T|TAA 570
MwoI GCNNNNN|NNGC 42, 272, 537, 588
NlaIII CATG| 93, 414, 451, 471, 508
NlaIV GGN|NCC 138, 162, 396
PspGI |CC[AT]GG 525
RsaI GT|AC 66, 417, 477, 651
SacI GAGCT|C 530
Sau3AI |GATC 125, 623
Sau96I G|GNCC 640
ScrFI CC|NGG 525
SmlI C|TPyPuAG 375, 628
Taqƒ¿I T|CGA 251, 491
TfiI G|A[AT]TC 198, 350
Tsp45I |GT[CG]AC 666
Tsp509I |AATT 2


Click here to view TAIR data

>AT2G35550.2 length:681
ATGAATTCAT TTCCTGCACA AAACCTTATG CTATCTGCTA CAAACGCAAA 
50
CAAGGACTCA GGCTTGCGTA CGTCTAATGC TCATTGGTTA CATTCATGTA 
100
TCGCCGTTCC AAAGACCACA GGCATTGATC TTTCTCAGGA ACCTCCTGCT 
150
GAAGGTGTGA TGGTGCCTCA ATCTCATTTG TTTCCTCCTC CTATTAGAGA 
200
TTCCAGAAAC GATACTGAAA CTGTGAAACA GAAGTCCGTA AATCAGTCTC 
250
CTTCGAAAGC TTTGAAGCCA AAACCGCAAA GGAAGAAACG CTCTGTATCC 
300
AACAAGTCAA AGAAAACACC TAGCATACCA GAAACAAAAC GTGAGAAAAA 
350
GAATCTGGAC ATCAACATTG ACATCTCAAG CTTTGATACT TCTGGGGTTC 
400
CTCCTCCTGT ATGTTCATGT ACAGGCGTTT CAAGGGTTTG CTACAAATGG 
450
GGCATGGGCG GTTGGCAATC CTCATGTTGT ACCATCAGCA TATCGACATA 
500
CCCACTACCC ATGAGCACAA CAAGACCTGG AGCTCGTCTT GCAGGAAGAA 
550
AAATGAGCAA TGGTGCTTAT GTTAAGCTCC TTGCGAGGCT TGCGGACGAA 
600
GGCTATGACC TCTCTCACCC TCTTGATCTC AAGAACCATT GGGCCAGACA 
650
CGGTACTAAC AAGTTTGTGA CCATCAAGTA G
700

>AT2G35550.2 longest ORF length:226
MNSFPAQNLM LSATNANKDS GLRTSNAHWL HSCIAVPKTT GIDLSQEPPA 
50
EGVMVPQSHL FPPPIRDSRN DTETVKQKSV NQSPSKALKP KPQRKKRSVS 
100
NKSKKTPSIP ETKREKKNLD INIDISSFDT SGVPPPVCSC TGVSRVCYKW 
150
GMGGWQSSCC TISISTYPLP MSTTRPGARL AGRKMSNGAY VKLLARLADE 
200
GYDLSHPLDL KNHWARHGTN KFVTIK
250