fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G36080 ABS2, NGAL1 AP2/B3-like transcriptional factor family protein (.1.2)

>AT2G36080.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NdeI, NheI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
KpnI GGTAC|C 505
NcoI C|CATGG 265
NotI GC|GGCCGC 201
StyI C|C[AT][AT]GG 265


Click here to view TAIR data

>AT2G36080.2 length:522
ATGTCAATAA ACCAATACTC AAGCGATTTC CACTACCATT CTCTCATGTG 
50
GCAACAACAG CAGCAACAAC AACAACACCA AAACGACGTC GTGGAAGAAA 
100
AAGAAGCTCT TTTCGAGAAA CCCTTAACCC CAAGTGACGT CGGAAAACTC 
150
AACCGCCTCG TCATCCCAAA ACAGCACGCC GAGAGATACT TCCCACTAGC 
200
GGCCGCCGCC GCAGACGCCG TGGAGAAAGG ACTTCTCCTC TGCTTTGAGG 
250
ACGAGGAAGG TAAACCATGG AGATTCAGAT ACTCGTACTG GAACAGTAGC 
300
CAGAGTTATG TCTTGACCAA AGGCTGGAGC AGATACGTCA AGGAGAAGCA 
350
CCTTGACGCC GGAGACGTCG TTCTCTTCCA TCGACACCGT TCAGACGGCG 
400
GAAGATTCTT CATTGGCTGG AGAAGACGCG GTGACTCTTC TTCCTCCTCC 
450
GACTCTTATC GCCATGTTCA ATCCAATGCC TCGCTCCAAT ATTATCCTCA 
500
TGCAGGTACC CTTTTTATTT AA
550

>AT2G36080.2 longest ORF length:173
MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL 
50
NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS 
100
QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS 
150
DSYRHVQSNA SLQYYPHAGT LFI
200