| Locus |
Common name |
Short description |
| AT2G36450 |
HRD |
HARDY, Integrase-type DNA-binding superfamily protein (.1) |
>AT2G36450.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglII, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaWI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstUI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HpaII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MspI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI
| Name |
Recognition sequence |
Cut positions |
| AciI
| C|CGC |
28, 276, 285 |
| AluI
| AG|CT |
172, 196, 201 |
| ApoI
| Pu|AATTPy |
543 |
| AvaI
| C|PyCGPuG |
142 |
| BanII
| GPuGCPy|C |
202 |
| BfaI
| C|TAG |
176, 306 |
| BglI
| GCCNNNN|NGGC |
282 |
| BlpI
| GC|TNAGC |
200 |
| BsiEI
| CGPuPy|CG |
27, 284 |
| BsiHKAI
| G[AT]GC[AT]|C |
202, 436 |
| BslI
| CCNNNNN|NNGG |
146 |
| BsmI
| GAATGCN| |
459 |
| BsoBI
| C|PyCGPuG |
142 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
202, 436 |
| BspHI
| T|CATGA |
440 |
| BsrGI
| T|GTACA |
41 |
| BssKI
| |CCNGG |
519 |
| BstF5I
| GGATGNN| |
313 |
| BstNI
| CC|[AT]GG |
519 |
| BstXI
| CCANNNNN|NTGG |
348 |
| BstYI
| Pu|GATCPy |
89 |
| Cac8I
| GCN|NGC |
234, 358 |
| DdeI
| C|TNAG |
85, 199, 218, 465 |
| DpnI
| GA-CH3|TC |
88 |
| DpnII
| |GATC |
88 |
| EaeI
| Py|GGCCPu |
27, 284 |
| EagI
| C|GGCCG |
27, 284 |
| Fnu4HI
| GC|NGC |
25, 56, 150, 171, 270, 276, 285, 291, 303, 495 |
| HaeIII
| GG|CC |
26, 283 |
| HinfI
| G|ANTC |
397 |
| Hpy188I
| TCN|GA |
84 |
| Hpy99I
| CG[AT]CG| |
503 |
| HpyCH4III
| ACN|GT |
112, 483 |
| HpyCH4IV
| A|CGT |
165 |
| HpyCH4V
| TG|CA |
0, 359 |
| MboI
| |GATC |
88 |
| MslI
| CAPyNN|NNPuTG |
445 |
| MspA1I
| C[AC]G|C[GT]G |
287 |
| MwoI
| GCNNNNN|NNGC |
156, 177, 276, 291, 312, 434, 504 |
| NlaIII
| CATG| |
247, 361, 400, 424, 439, 549 |
| NlaIV
| GGN|NCC |
7 |
| NotI
| GC|GGCCGC |
28 |
| NspI
| PuCATG|Py |
425 |
| PspGI
| |CC[AT]GG |
519 |
| RsaI
| GT|AC |
40 |
| SacI
| GAGCT|C |
202 |
| Sau3AI
| |GATC |
88 |
| ScrFI
| CC|NGG |
519 |
| Taqƒ¿I
| T|CGA |
420 |
| TfiI
| G|A[AT]TC |
397 |
| TseI
| G|C[AT]GC |
56, 171, 270, 288, 303, 495 |
| Tsp509I
| |AATT |
542 |
| XmnI
| GAANN|NNTTC |
397 |
Click here to view TAIR data
>AT2G36450.1 length:555
ATGCAAGGAA CCTCCAAAGA CAATGGCGGC CGCCACCCTT TGTACAGGGG | 50 |
AGTAAGGCAG CGAAAGAACT CAAACAAATG GGTTTCTGAG ATCCGTGAGC | 100 |
CGAGAAAACC TAACCGTATC TGGTTAGGAA CATTCTCTAC CCCCGAGATG | 150 |
GCGGCAATAG CCTATGACGT GGCAGCTCTA GCCCTCAAAG GCAGTCAAGC | 200 |
TGAGCTCAAC TTCCCAAACT CAGTTTCCTC TTTGCCTGCC CCAACCTCCA | 250 |
TGTCTCCAGC AGACATCCAA GCAGCAGCCG CTTCGGCCGC TGCTGCTTTT | 300 |
GGTGCTGCTA GGGATGCGAT TGTTATGGCA AATAATAACA GCCAAACAAG | 350 |
TGGTGTGGCT TGCATGAATA GTAGTTATGA TAATACAAAT ATGAATGGAT | 400 |
TCATGGACGA GGATTTGGTA TTCGACATGC CTAATGTGCT CATGAATATG | 450 |
GCTGAAGGAA TGCTTCTTAG CCCCCCTCGT CCTACTGTCT TTGATGCTGC | 500 |
TTACGACGCT GATGGTTTTC CTGGAGGAGA CGATTACTTG TGGAATTTTC | 550 |
CATGA | 600 |
>AT2G36450.1 longest ORF length:184
MQGTSKDNGG RHPLYRGVRQ RKNSNKWVSE IREPRKPNRI WLGTFSTPEM | 50 |
AAIAYDVAAL ALKGSQAELN FPNSVSSLPA PTSMSPADIQ AAAASAAAAF | 100 |
GAARDAIVMA NNNSQTSGVA CMNSSYDNTN MNGFMDEDLV FDMPNVLMNM | 150 |
AEGMLLSPPR PTVFDAAYDA DGFPGGDDYL WNFP | 200 |
|