fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G36960 TKI1 TSL-kinase interacting protein 1 (.1.2.3)

>AT2G36960.2 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
ApaI GGGCC|C 321
BglII A|GATCT 1474
EcoRV GAT|ATC 1053
HindIII A|AGCTT 413, 672, 949
PstI CTGCA|G 803
PvuII CAG|CTG 902, 961
StyI C|C[AT][AT]GG 464, 687, 995
XbaI T|CTAGA 1477
XhoI C|TCGAG 1318


Click here to view TAIR data

>AT2G36960.2 length:2226
ATGCTTAAAC AGTTTACGCA TTATTGCGAA ATGCAAGCCG AGCTGATACC 
50
CGAAGGTCCT AACGGTGAGG GCCGTTTATC AAACCAGAAC AGCAACCCTA 
100
ATTTACTCTC TTCTGCTTCT ATCAGTATTA CTCAGTTTCC TGCTAAGAAG 
150
CCGACTAGGC AATGGGCTGC TTGGACACAT CAAGAAGAGG AAAGTTTCTT 
200
CACTGCTCTT CGTCAAGTTG GAAAGAATTT TGAGAAGATA ACTTCTCGTG 
250
TTCAGAGCAA AAACAAGGAC CAGGTCAGGC ATTACTATTA TCGTTTAGTG 
300
AGGCGTATGA ACAAACTTTT GGGCCCGGAT CTGAGCCTTG ATGCCAAGAA 
350
CCCAAAGGAC ACCAATGCTG CAATGCTACG ATGGTGGTCT TTGCTTGAAA 
400
AGTATAGCTG CAAAGCTTCA AAACTTCATC TCAAGCCCCG GAGATTCAAA 
450
CTATTTATAG AGGCCTTGGA ACACCAATTG CTGAAAGACC GCAGAAAGAG 
500
CATAAGAAAA CGGACTTGCC AGGGAGAAAA TCTCTCTTCT GCTTCCCTCG 
550
GAAACATCTC AAGTCATAGT AGAGAAAGAG GATTGGATAA CCGTCCATTT 
600
AAACTTATTC TCTCCGACGG CCAAAATGTT AAAAAGCTAG GGCCTGGAAG 
650
AGCATCTACC AAACATGGTG AAAGCTTAAG TGTCAACCTT GGTGACGAAA 
700
AAGAAGACAC AGCCTTTGGG AGAGGTGGAA GGCAACGGCG AAAACAAGGT 
750
TATAGAAAAT GGGAAAAAGC TGCAATAGAT GGGGTCTCTC TGGTTGCTGA 
800
TGCTGCAGAG CATTTGGAAC GAACATCAAT TGACAAAGAT ATGGATGATC 
850
AAACAGGTCC CACAAGATAT TTAACCGGAA AGTCTCCACT TTCTCTATGC 
900
TCAGCTGGTG ATGTTCCTCT CAGTGATGCC AATATGCAGT TTTCTGCCAA 
950
GCTTAAACTT CAGCTGTTCC CGATTGATGA ATGTACTCGA AGATCCTTGG 
1000
AAATGGATAA GCACAATCCG CATCTTGAAC TTACTCTTAG TAATCGCAAG 
1050
AAGATATCAT CTGTACTTGA ACATCTCAAT CGCAAATGGG GAAGCTCAAG 
1100
TTGTGCGACT GGAGAGCTAT TGCTATTTCC TTACAACGCA CGAAAAGAAA 
1150
CTGTAACGTG CCATCAGAGG TGGACCCATG ACTCTTTTCT AAGCGCAGCA 
1200
GAAGTGCATT CAATGGTCGG AAGTCCTTCG GTTTTCCGCT TAAGGTATGG 
1250
TTGGTTTGTC CATGATGCGT CAGGTTCTAT TATTTCTCAA GTTCCAACTT 
1300
CAGATCCTTG CCCTTCACTC GAGGATGACA TGAATGTGGA TAGGTTGAAC 
1350
GAGGTCAACA TGCTCCTTAC TGAATCAGGA CCCTTGTCTG TGCATTCAAC 
1400
TGCTGAACAA ACGACATCTG TAGAGCCCAG TCAGGGTCTA GTATGTGCAT 
1450
CTGGTGTCCA TGATCGTCCC GCAAGATCTA GAGATGATTA TGAACCTGCT 
1500
TCAACGAGTA TTACTCCACT TGAGCATTTG AGCGGCGGTA ATGCACAATC 
1550
ACCAGGAGAA TGGGCTGATA GTCTTACTAA CATAAGTATA GGTGATCTAC 
1600
TTTCTGAAGT GCCCGATGAC ATAGATAGTG ATGGTGTTGA TCCACCTGCC 
1650
ACCGAAGGTT CACATTACCT CCTTCGAGAT GTCCCATTTA CCTCTGACTC 
1700
TTTTGATGCT GCAATTGCTG CTCATATACT AAGACACCAG AACAAGCCAA 
1750
GTGCTCAACT ACCGCTGACT TCTGGCTCTT CCTCTCTGTG GGATGATGAA 
1800
GAAACACGTG ATGCCTTCTC TTTCCAAAAA AATCGTTTCG CAAATTCCAC 
1850
CGAGCTGGCT AGTGTTGCTT CTCCTAAAGG TGTTGGCAGA GTAAATGGAG 
1900
AGCCTTCACA GTTGGTGGAG GCTTCATCCG GCGATGAGGG ATCTTATAAC 
1950
CCTCATGACG ATGGAGATCC AATGGAAGAG GGTCCAGCAG ACCCTCATAC 
2000
GATGGATTCT CCAGGGAAGA CCCCTTGTGG ACTTGCGGAT GTATACTGGC 
2050
CCGACTCGTT AGGACCACTG GATTTAGACA TTAGATCGTC AAAGTATACA 
2100
GATGATTTGA TCCTTAGTGA GAGCCTCGGG GGATTGAGCC GTCTGATAGC 
2150
AACCAGCCTT GATGCGTTTC AGAACTGCTC GCTCTTTGGG TTCGACAATA 
2200
AGAAGGACAA GTCTAACATG GTATGA
2250

>AT2G36960.2 longest ORF length:741
MLKQFTHYCE MQAELIPEGP NGEGRLSNQN SNPNLLSSAS ISITQFPAKK 
50
PTRQWAAWTH QEEESFFTAL RQVGKNFEKI TSRVQSKNKD QVRHYYYRLV 
100
RRMNKLLGPD LSLDAKNPKD TNAAMLRWWS LLEKYSCKAS KLHLKPRRFK 
150
LFIEALEHQL LKDRRKSIRK RTCQGENLSS ASLGNISSHS RERGLDNRPF 
200
KLILSDGQNV KKLGPGRAST KHGESLSVNL GDEKEDTAFG RGGRQRRKQG 
250
YRKWEKAAID GVSLVADAAE HLERTSIDKD MDDQTGPTRY LTGKSPLSLC 
300
SAGDVPLSDA NMQFSAKLKL QLFPIDECTR RSLEMDKHNP HLELTLSNRK 
350
KISSVLEHLN RKWGSSSCAT GELLLFPYNA RKETVTCHQR WTHDSFLSAA 
400
EVHSMVGSPS VFRLRYGWFV HDASGSIISQ VPTSDPCPSL EDDMNVDRLN 
450
EVNMLLTESG PLSVHSTAEQ TTSVEPSQGL VCASGVHDRP ARSRDDYEPA 
500
STSITPLEHL SGGNAQSPGE WADSLTNISI GDLLSEVPDD IDSDGVDPPA 
550
TEGSHYLLRD VPFTSDSFDA AIAAHILRHQ NKPSAQLPLT SGSSSLWDDE 
600
ETRDAFSFQK NRFANSTELA SVASPKGVGR VNGEPSQLVE ASSGDEGSYN 
650
PHDDGDPMEE GPADPHTMDS PGKTPCGLAD VYWPDSLGPL DLDIRSSKYT 
700
DDLILSESLG GLSRLIATSL DAFQNCSLFG FDNKKDKSNM V
750