fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G37060 NF-YB8 "nuclear factor Y, subunit B8", nuclear factor Y, subunit B8 (.1.2.3)

>AT2G37060.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 393
EcoRI G|AATTC 202
NdeI CA|TATG 490
StyI C|C[AT][AT]GG 456


Click here to view TAIR data

>AT2G37060.3 length:522
ATGGCGGAGT CGCAGGCCAA GAGTCCCGGA GGCTGTGGAA GCCATGAGAG 
50
TGGTGGAGAT CAAAGTCCCA GGTCGTTACA TGTTCGTGAG CAAGATAGGT 
100
TTCTTCCGAT TGCTAACATA AGCCGTATCA TGAAAAGAGG TCTTCCTGCT 
150
AATGGGAAAA TCGCTAAAGA TGCTAAGGAG ATTGTGCAGG AATGTGTCTC 
200
TGAATTCATC AGTTTCGTCA CCAGCGAAGC GAGTGATAAA TGTCAAAGAG 
250
AGAAAAGGAA GACTATTAAT GGAGATGATT TGCTTTGGGC AATGGCTACT 
300
TTAGGATTTG AAGACTACAT GGAACCTCTC AAGGTTTACC TGATGAGATA 
350
TAGAGAGATG GAGGGTGACA CAAAGGGATC AGCAAAAGGT GGGGATCCAA 
400
ATGCAAAGAA AGATGGGCAA TCAAGCCAAA ATGGCCAGTT CTCGCAGCTT 
450
GCTCACCAAG GTCCTTATGG GAACTCTCAA GCTCAGCAGC ATATGATGGT 
500
TCCAATGCCG GGAACAGACT AG
550

>AT2G37060.3 longest ORF length:173
MAESQAKSPG GCGSHESGGD QSPRSLHVRE QDRFLPIANI SRIMKRGLPA 
50
NGKIAKDAKE IVQECVSEFI SFVTSEASDK CQREKRKTIN GDDLLWAMAT 
100
LGFEDYMEPL KVYLMRYREM EGDTKGSAKG GDPNAKKDGQ SSQNGQFSQL 
150
AHQGPYGNSQ AQQHMMVPMP GTD
200