Locus |
Common name |
Short description |
AT2G37590 |
AtDof2. 4, ATDOF2.4 |
DNA binding with one finger 2.4 (.1) |
>AT2G37590.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BbsI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsoBI, BspDI, BspEI, BspMI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstBI, BstEII, BstF5I, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeIII, HgaI, HincII, HindIII, HpaI, HphI, Hpy99I, HpyCH4III, I-CeuI, I-SceI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PspOMI, PvuI, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfiI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AciI
| C|CGC |
152, 385, 816 |
AflII
| C|TTAAG |
558 |
AflIII
| A|CPuPyGT |
370 |
AhdI
| GACNNN|NNGTC |
687 |
AluI
| AG|CT |
120, 379, 650, 703, 725 |
BanI
| G|GPyPuCC |
85 |
BanII
| GPuGCPy|C |
380 |
BbvCI
| CC|TCAGC |
90, 119 |
BfaI
| C|TAG |
468 |
BglII
| A|GATCT |
615 |
BsaAI
| PyAC|GTPu |
371 |
BsaBI
| GATNN|NNATC |
282 |
BsaHI
| GPu|CGPyC |
85, 750 |
BsaJI
| C|CNNGG |
847 |
BsiHKAI
| G[AT]GC[AT]|C |
380 |
BslI
| CCNNNNN|NNGG |
402, 823 |
BsmI
| GAATGCN| |
499 |
Bsp1286I
| G[GAT]GC[CAT]|C |
380 |
BspHI
| T|CATGA |
72 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
85 |
BsrBI
| GAG|CGG |
168 |
BsrI
| ACTGGN| |
41, 365 |
BssKI
| |CCNGG |
493, 955 |
BstAPI
| GCANNNN|NTGC |
352 |
BstNI
| CC|[AT]GG |
955 |
BstYI
| Pu|GATCPy |
615 |
Cac8I
| GCN|NGC |
716 |
DdeI
| C|TNAG |
89, 118 |
DpnI
| GA-CH3|TC |
199, 210, 614, 744, 962 |
DpnII
| |GATC |
199, 210, 614, 744, 962 |
Fnu4HI
| GC|NGC |
122, 134, 146, 152, 193, 258, 409 |
HaeII
| PuGCGC|Py |
85 |
HhaI
| GCG|C |
84 |
HinP1I
| G|CGC |
84 |
HinfI
| G|ANTC |
30, 282, 518, 590, 674, 795, 840 |
HpaII
| C|CGG |
355, 412, 492, 575 |
Hpy188I
| TCN|GA |
56, 202, 272, 610 |
HpyCH4IV
| A|CGT |
240, 370, 390 |
HpyCH4V
| TG|CA |
123, 344, 499 |
KasI
| G|GCGCC |
85 |
MboI
| |GATC |
199, 210, 614, 744, 962 |
MseI
| T|TAA |
557, 900, 930 |
MslI
| CAPyNN|NNPuTG |
161, 267 |
MspA1I
| C[AC]G|C[GT]G |
121 |
MspI
| C|CGG |
355, 412, 492, 575 |
MwoI
| GCNNNNN|NNGC |
131, 143, 234, 343, 409 |
N.BstNBI
| GAGTCNNNN|N |
679, 845 |
NarI
| GG|CGCC |
85 |
NciI
| CC|[CG]GG |
493 |
NlaIII
| CATG| |
71, 104, 646, 697 |
NlaIV
| GGN|NCC |
51, 85 |
NsiI
| ATGCA|T |
500 |
PmlI
| CAC|GTG |
371 |
PsiI
| TTA|TAA |
66 |
PspGI
| |CC[AT]GG |
955 |
PstI
| CTGCA|G |
124 |
PvuII
| CAG|CTG |
121 |
RsaI
| GT|AC |
426 |
SacI
| GAGCT|C |
380 |
Sau3AI
| |GATC |
199, 210, 614, 744, 962 |
ScrFI
| CC|NGG |
493, 955 |
SfcI
| C|TPuPyAG |
124, 318 |
SfoI
| GGC|GCC |
85 |
SmlI
| C|TPyPuAG |
558, 684 |
Taqƒ¿I
| T|CGA |
197 |
TfiI
| G|A[AT]TC |
30, 282, 518, 590, 795 |
TseI
| G|C[AT]GC |
122, 134, 146, 258, 409 |
Tsp509I
| |AATT |
62, 944 |
TspRI
| NNCA[CG]TGNN| |
264, 463 |
Click here to view TAIR data
>AT2G37590.1 length:993
ATGGTTTTCT CCTCCATCCA AGCCTATCTT GATTCATCCA ACTGGCAACA | 50 |
GGCTCCTCCG AGCAATTATA ATCATGACGG AACAGGCGCC TCAGCAAATG | 100 |
GAGGTCATGT TCTTCGTCCT CAGCTGCAGC CACAGCAGCA GCCACAGCAG | 150 |
CAGCCGCATC CTAATGGGAG CGGGGGCGGA GGTGGAGGTG GAGGCGGCTC | 200 |
GATCCGAGCA GGATCAATGG TGGACAGAGC AAGACAAGCA AACGTAGCCT | 250 |
TGCCAGAAGC AGCACTGAAA TGTCCGAGAT GCGAATCCAC CAACACCAAG | 300 |
TTCTGCTACT TCAACAACTA CAGCCTCACT CAACCACGCC ACTTCTGCAA | 350 |
GACCTGCCGG AGATACTGGA CACGTGGCGG AGCTCTCCGC AACGTCCCAG | 400 |
TCGGCGGTGG CTGCCGGAGA AACAGGCGTA CCAAAAGCAA CAGCAACAAC | 450 |
AACAATAACA GCACTGCTAC TAGCAATAAC ACCAGTTTCT CCTCCGGGAA | 500 |
TGCATCCACC ATCAGCACGA TTCTCTCCTC CCACTATGGA GGAAACCAAG | 550 |
AGAGTATCTT AAGCCAGATT TTGTCTCCGG CGAGGCTAAT GAATCCTACT | 600 |
TACAATCATC TCGGAGATCT CACAAGTAAT ACAAAAACAG ACAACAACAT | 650 |
GAGCTTGTTG AACTATGGAG GATTGAGTCA AGACTTGAGG TCAATCCACA | 700 |
TGGGAGCTTC TGGTGGCTCG CTTATGAGCT GTGTTGATGA ATGGAGATCG | 750 |
GCGTCTTATC ATCAGCAGTC AAGTATGGGC GGTGGGAACT TGGAGGATTC | 800 |
TTCTAATCCT AATCCATCCG CAAATGGGTT TTACTCTTTT GAGTCGCCGA | 850 |
GGATAACTTC AGCGTCAATC TCTTCTGCTT TAGCATCGCA GTTTTCTTCG | 900 |
GTTAAAGTTG AAGATAATCC TTACAAATGG GTTAATGTCA ATGGTAATTG | 950 |
CTCTTCCTGG AATGATCTTT CTGCTTTCGG CTCTTCTCGT TGA | 1000 |
>AT2G37590.1 longest ORF length:330
MVFSSIQAYL DSSNWQQAPP SNYNHDGTGA SANGGHVLRP QLQPQQQPQQ | 50 |
QPHPNGSGGG GGGGGGSIRA GSMVDRARQA NVALPEAALK CPRCESTNTK | 100 |
FCYFNNYSLT QPRHFCKTCR RYWTRGGALR NVPVGGGCRR NRRTKSNSNN | 150 |
NNNSTATSNN TSFSSGNAST ISTILSSHYG GNQESILSQI LSPARLMNPT | 200 |
YNHLGDLTSN TKTDNNMSLL NYGGLSQDLR SIHMGASGGS LMSCVDEWRS | 250 |
ASYHQQSSMG GGNLEDSSNP NPSANGFYSF ESPRITSASI SSALASQFSS | 300 |
VKVEDNPYKW VNVNGNCSSW NDLSAFGSSR | 350 |
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