fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G38090 MYB-R Duplicated homeodomain-like superfamily protein (.1)

>AT2G38090.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 379
EcoRV GAT|ATC 610
NcoI C|CATGG 424
PstI CTGCA|G 647
PvuII CAG|CTG 89, 758
StyI C|C[AT][AT]GG 424
XbaI T|CTAGA 39


Click here to view TAIR data

>AT2G38090.1 length:897
ATGAACAGAG GAATCGAAGT TATGTCACCA GCAACATATC TAGAGACATC 
50
AAACTGGTTG TTTCAAGAAA ACAGAGGAAC CAAATGGACA GCTGAAGAAA 
100
ACAAGAAATT CGAAAACGCT TTAGCCTTTT ACGACAAAGA TACTCCCGAC 
150
AGATGGTCCA GAGTCGCTGC CATGCTTCCC GGTAAAACAG TCGGAGATGT 
200
GATCAAACAA TACAGAGAGC TTGAGGAAGA CGTTAGCGAC ATCGAAGCTG 
250
GTCTTATACC AATCCCTGGT TACGCCTCTG ATTCATTCAC ACTTGATTGG 
300
GGTGGCTACG ACGGAGCAAG CGGTAACAAT GGGTTTAACA TGAACGGTTA 
350
CTACTTTTCC GCCGCCGGAG GAAAGAGAGG ATCCGCCGCA CGAACGGCGG 
400
AGCATGAGAG GAAGAAAGGT GTTCCATGGA CAGAAGAAGA ACACAGACAA 
450
TTTCTGATGG GTTTGAAGAA ATATGGAAAA GGAGATTGGA GAAACATAGC 
500
TCGTAACTTT GTGACCACAA GAACGCCAAC GCAAGTCGCA AGTCACGCTC 
550
AAAAGTATTT CATACGGCAA GTCAATGGTG GCAAAGACAA ACGCCGTTCA 
600
AGCATCCATG ATATCACAAC CGTCAACATC CCCGACTCTC CTGACGCTGC 
650
AGCCGCGGAT AACGCAACCG CAAACGCACC TTGCTCGCCA CCTTCCGTAG 
700
GAGGAAACCA GCGGGAGACA TCGGAGTGGG AAGGTCAAAC ACTATACGAT 
750
GAAACAGCAG CTGCGTTTTA TAATCAAAAC GCGTTTTCAG AAACGCTACT 
800
TGGAATGTCT TCGACGCCCT ACATGGCAAA ACTTCAGGAG CAGAGTTTTC 
850
TGAACGCATC GCAATTCGAA TCGTACAATG CGTATCTCCA AATGTAG
900

>AT2G38090.1 longest ORF length:298
MNRGIEVMSP ATYLETSNWL FQENRGTKWT AEENKKFENA LAFYDKDTPD 
50
RWSRVAAMLP GKTVGDVIKQ YRELEEDVSD IEAGLIPIPG YASDSFTLDW 
100
GGYDGASGNN GFNMNGYYFS AAGGKRGSAA RTAEHERKKG VPWTEEEHRQ 
150
FLMGLKKYGK GDWRNIARNF VTTRTPTQVA SHAQKYFIRQ VNGGKDKRRS 
200
SIHDITTVNI PDSPDAAAAD NATANAPCSP PSVGGNQRET SEWEGQTLYD 
250
ETAAAFYNQN AFSETLLGMS STPYMAKLQE QSFLNASQFE SYNAYLQM
300