fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G38300 myb-like HTH transcriptional regulator family protein (.1)

>AT2G38300.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 151


Click here to view TAIR data

>AT2G38300.1 length:1023
ATGATTCCAA GTATGGAGGG AGGCGGGAAG ACTAACAGAG AAGAAGAGGA 
50
GGAGGAAGAG GAAGAAGAAG AAGAAGGTGA AGAGAGTAAG GTTTCAAGCA 
100
ATAGTACAGT GGAAGAGAGC GACAAGAAGA CTAAGGTTAG GCCTTATGTG 
150
AGATCTAAAG TCCCTCGACT CCGGTGGACT CCTGATCTTC ATCTTCGCTT 
200
TGTCCGCGCC GTTGAGAGGC TTGGAGGTCA AGAAAGAGCA ACTCCAAAGT 
250
TGGTTCGTCA GATGATGAAC ATCAAAGGGC TTAGTATTGC TCATGTCAAG 
300
AGCCATCTAC AGATGTACAG AAGCAAGAAG ATAGATGATC AAGGTCAAGC 
350
TATAGCTGGT CACAAACATC TCTTCGAGAC TTCCACAGAT CGAAATATTT 
400
ATAAACTAAG TCAGCTACCG ATGTTCCGAG GCTATAATCA TAACCATGAT 
450
TCTCCATTCA GATATGGAAG TAAAATTTCA AATGCTTCTT TGTGGAACTC 
500
TAGCTCTCAA GGAACAGAAA GGAGTTTGAT AGACCAAATT AGGCCCGGTT 
550
TAATCCGCAA CGCGTCGGTT AGCAATAACA TCCGTGGTAG TGATTATTGG 
600
ACTAACAACA AGTCTTTCCA AAACATCTAC TCTTCTTCAA TTTCTAATCA 
650
CTTTCCGAAA CTACGACACG ATCATCACGA ACGGACCAAT TCAGTCACAT 
700
TCAACAGCAT TCAAGGACAC TCAAGAACTT TTCAAAAGTT CCATAACGGT 
750
GTTGAGGAGA ACACTAATCA TTCTTATTGT AGCAAGACAA ATGGCAAAAG 
800
AGACGCAAGT AGGAGCATTG ATCTTGATCT ATCTCTTAAG CTAAGACAAC 
850
CGGAGAAGAC AATTTTGGAA GAGACAGAAA CAGCAGCAAC AACAACGGAT 
900
CAAACGTTGT CCTTGTCGCT ATGTCCAGGG TCGTCTTCGT GGAAAAAGAG 
950
CCGACTGATG AAAGATGAAG AGGATCGGAC GGTTAAGATT GGTCAGGAGA 
1000
GTACTCTGGA TCTGACTCTA TGA
1050

>AT2G38300.1 longest ORF length:340
MIPSMEGGGK TNREEEEEEE EEEEEGEESK VSSNSTVEES DKKTKVRPYV 
50
RSKVPRLRWT PDLHLRFVRA VERLGGQERA TPKLVRQMMN IKGLSIAHVK 
100
SHLQMYRSKK IDDQGQAIAG HKHLFETSTD RNIYKLSQLP MFRGYNHNHD 
150
SPFRYGSKIS NASLWNSSSQ GTERSLIDQI RPGLIRNASV SNNIRGSDYW 
200
TNNKSFQNIY SSSISNHFPK LRHDHHERTN SVTFNSIQGH SRTFQKFHNG 
250
VEENTNHSYC SKTNGKRDAS RSIDLDLSLK LRQPEKTILE ETETAATTTD 
300
QTLSLSLCPG SSSWKKSRLM KDEEDRTVKI GQESTLDLTL 
350