Locus |
Common name |
Short description |
AT2G38340 |
DREB2E, DREB19 |
dehydration response element-binding protein 19, Integrase-type DNA-binding superfamily protein (.1) |
>AT2G38340.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI
Name |
Recognition sequence |
Cut positions |
PstI
| CTGCA|G |
326 |
PvuII
| CAG|CTG |
329 |
SacI
| GAGCT|C |
30, 128 |
XhoI
| C|TCGAG |
54 |
Click here to view TAIR data
>AT2G38340.1 length:735
ATGGAAAAGG AAGATAACGG ATCGAAACAG AGCTCCTCTG CTTCTGTTGT | 50 |
ATCCTCGAGA AGACGAAGAA GAGTGGTTGA GCCAGTGGAA GCGACGTTAC | 100 |
AGAGATGGGA GGAAGAAGGA TTGGCGAGAG CTCGTAGGGT TCAAGCCAAA | 150 |
GGTTCGAAGA AAGGTTGTAT GAGAGGAAAA GGTGGACCAG AGAATCCTGT | 200 |
TTGTCGGTTT AGAGGTGTTC GACAAAGGGT TTGGGGGAAA TGGGTTGCTG | 250 |
AGATACGTGA ACCAGTGAGT CACCGTGGTG CAAACTCTAG TCGTAGTAAA | 300 |
CGGCTTTGGC TTGGCACGTT TGCTACTGCA GCTGAAGCTG CTTTGGCTTA | 350 |
CGACAGAGCT GCTAGTGTCA TGTACGGACC CTATGCCAGG TTAAATTTCC | 400 |
CGGAAGATTT GGGTGGGGGA AGGAAGAAGG ACGAGGAGGC GGAAAGTTCG | 450 |
GGAGGCTATT GGTTGGAAAC TAACAAAGCC GGTAATGGCG TGATTGAAAC | 500 |
GGAAGGTGGA AAAGACTATG TAGTCTACAA TGAAGACGCT ATTGAGCTTG | 550 |
GCCATGACAA GACTCAGAAT CCTATGACTG ATAATGAAAT AGTGAACCCA | 600 |
GCAGTGAAAT CAGAGGAAGG TTACAGCTAT GATCGATTCA AATTGGATAA | 650 |
CGGATTGTTG TATAATGAAC CTCAAAGCTC CAGTTATCAC CAGGGAGGTG | 700 |
GATTCGATTC ATATTTTGAG TATTTCAGAT TCTAG | 750 |
>AT2G38340.1 longest ORF length:244
MEKEDNGSKQ SSSASVVSSR RRRRVVEPVE ATLQRWEEEG LARARRVQAK | 50 |
GSKKGCMRGK GGPENPVCRF RGVRQRVWGK WVAEIREPVS HRGANSSRSK | 100 |
RLWLGTFATA AEAALAYDRA ASVMYGPYAR LNFPEDLGGG RKKDEEAESS | 150 |
GGYWLETNKA GNGVIETEGG KDYVVYNEDA IELGHDKTQN PMTDNEIVNP | 200 |
AVKSEEGYSY DRFKLDNGLL YNEPQSSSYH QGGGFDSYFE YFRF | 250 |
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