fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G38340 DREB2E, DREB19 dehydration response element-binding protein 19, Integrase-type DNA-binding superfamily protein (.1)

>AT2G38340.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
PstI CTGCA|G 326
PvuII CAG|CTG 329
SacI GAGCT|C 30, 128
XhoI C|TCGAG 54


Click here to view TAIR data

>AT2G38340.1 length:735
ATGGAAAAGG AAGATAACGG ATCGAAACAG AGCTCCTCTG CTTCTGTTGT 
50
ATCCTCGAGA AGACGAAGAA GAGTGGTTGA GCCAGTGGAA GCGACGTTAC 
100
AGAGATGGGA GGAAGAAGGA TTGGCGAGAG CTCGTAGGGT TCAAGCCAAA 
150
GGTTCGAAGA AAGGTTGTAT GAGAGGAAAA GGTGGACCAG AGAATCCTGT 
200
TTGTCGGTTT AGAGGTGTTC GACAAAGGGT TTGGGGGAAA TGGGTTGCTG 
250
AGATACGTGA ACCAGTGAGT CACCGTGGTG CAAACTCTAG TCGTAGTAAA 
300
CGGCTTTGGC TTGGCACGTT TGCTACTGCA GCTGAAGCTG CTTTGGCTTA 
350
CGACAGAGCT GCTAGTGTCA TGTACGGACC CTATGCCAGG TTAAATTTCC 
400
CGGAAGATTT GGGTGGGGGA AGGAAGAAGG ACGAGGAGGC GGAAAGTTCG 
450
GGAGGCTATT GGTTGGAAAC TAACAAAGCC GGTAATGGCG TGATTGAAAC 
500
GGAAGGTGGA AAAGACTATG TAGTCTACAA TGAAGACGCT ATTGAGCTTG 
550
GCCATGACAA GACTCAGAAT CCTATGACTG ATAATGAAAT AGTGAACCCA 
600
GCAGTGAAAT CAGAGGAAGG TTACAGCTAT GATCGATTCA AATTGGATAA 
650
CGGATTGTTG TATAATGAAC CTCAAAGCTC CAGTTATCAC CAGGGAGGTG 
700
GATTCGATTC ATATTTTGAG TATTTCAGAT TCTAG
750

>AT2G38340.1 longest ORF length:244
MEKEDNGSKQ SSSASVVSSR RRRRVVEPVE ATLQRWEEEG LARARRVQAK 
50
GSKKGCMRGK GGPENPVCRF RGVRQRVWGK WVAEIREPVS HRGANSSRSK 
100
RLWLGTFATA AEAALAYDRA ASVMYGPYAR LNFPEDLGGG RKKDEEAESS 
150
GGYWLETNKA GNGVIETEGG KDYVVYNEDA IELGHDKTQN PMTDNEIVNP 
200
AVKSEEGYSY DRFKLDNGLL YNEPQSSSYH QGGGFDSYFE YFRF
250