fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G38880 ATNF-YB1, ATHAP3, HAP3A "nuclear factor Y, subunit B1", HEME ACTIVATOR PROTEIN \(YEAST\) HOMOLOG 3A, HEME ACTIVATOR PROTEIN \(YEAST\) HOMOLOG 3, NUCLEAR FACTOR Y SUBUNIT B1, HEME ACTIVATOR PROTEIN \(YEAST\) HOMOLOG 3, nuclear factor Y, subunit B1 (.1.2.3.4.5.6.7.8)

>AT2G38880.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
PvuII CAG|CTG 23


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>AT2G38880.1 length:426
ATGGCGGATA CGCCTTCGAG CCCAGCTGGA GATGGCGGAG AAAGCGGCGG 
50
TTCCGTTAGG GAGCAGGATC GATACCTTCC TATAGCTAAT ATCAGCAGGA 
100
TCATGAAGAA AGCGTTGCCT CCTAATGGTA AGATTGGAAA AGATGCTAAG 
150
GATACAGTTC AGGAATGCGT CTCTGAGTTC ATCAGCTTCA TCACTAGCGA 
200
GGCCAGTGAT AAGTGTCAAA AAGAGAAAAG GAAAACTGTG AATGGTGATG 
250
ATTTGTTGTG GGCAATGGCA ACATTAGGAT TTGAGGATTA CCTGGAACCT 
300
CTAAAGATAT ACCTAGCGAG GTACAGGGAG TTGGAGGGTG ATAATAAGGG 
350
ATCAGGAAAG AGTGGAGATG GATCAAATAG AGATGCTGGT GGCGGTGTTT 
400
CTGGTGAAGA AATGCCGAGC TGGTAA
450

>AT2G38880.1 longest ORF length:141
MADTPSSPAG DGGESGGSVR EQDRYLPIAN ISRIMKKALP PNGKIGKDAK 
50
DTVQECVSEF ISFITSEASD KCQKEKRKTV NGDDLLWAMA TLGFEDYLEP 
100
LKIYLARYRE LEGDNKGSGK SGDGSNRDAG GGVSGEEMPS W
150