Locus |
Common name |
Short description |
AT2G39900 |
WLIM2a |
WLIM2a, GATA type zinc finger transcription factor family protein (.1) |
>AT2G39900.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SmaI, SpeI, StyI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
426 |
PstI
| CTGCA|G |
572 |
PvuII
| CAG|CTG |
71, 566, 575 |
SalI
| G|TCGAC |
287 |
XbaI
| T|CTAGA |
450 |
Click here to view TAIR data
>AT2G39900.1 length:603
ATGTCGTTTA CAGGAACTCA GCAGAAATGC AGGGCGTGCG AGAAGACAGT | 50 |
GTACCCTGTG GAGCTTCTCT CAGCTGATGG AATCTCTTAT CACAAGGCTT | 100 |
GCTTCAAATG CTCTCACTGC AAAAGCAGAC TTCAACTGAG CAATTATTCA | 150 |
TCAATGGAAG GAGTGGTGTA TTGTAGGCCT CATTTTGAGC AGCTTTTCAA | 200 |
GGAGTCTGGT AGTTTCAGCA AGAACTTTCA GTCACCTGCA AAGCCATTGA | 250 |
CTGATAAGCC AACCCCGGAG CTGAATAGGA CACCTAGTCG ACTTGCTGGT | 300 |
ATGTTCTCTG GAACGCAAGA CAAATGCGCT ACTTGCACTA AAACCGTGTA | 350 |
TCCTATCGAA AAGGTAACTG TGGAAAGCCA GTGTTACCAT AAATCTTGCT | 400 |
TCAAGTGTTC TCATGGAGGC TGTCCGATAT CTCCATCGAA CTATGCAGCT | 450 |
CTAGAGGGAA TATTGTACTG CAAGCACCAT TTCGCTCAGC TTTTCAAGGA | 500 |
GAAAGGAAGT TACAATCATC TCATCAAATC TGCTTCCATC AAACGCGCTA | 550 |
CTGCTGCTGC TACCGCAGCT GCTGCAGCTG TAGCAGCCGT TCCCGAATCT | 600 |
TGA | 650 |
>AT2G39900.1 longest ORF length:200
MSFTGTQQKC RACEKTVYPV ELLSADGISY HKACFKCSHC KSRLQLSNYS | 50 |
SMEGVVYCRP HFEQLFKESG SFSKNFQSPA KPLTDKPTPE LNRTPSRLAG | 100 |
MFSGTQDKCA TCTKTVYPIE KVTVESQCYH KSCFKCSHGG CPISPSNYAA | 150 |
LEGILYCKHH FAQLFKEKGS YNHLIKSASI KRATAAATAA AAAVAAVPES | 200 |
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