fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G40140 ATSZF2, CZF1, ZFAR1 \(SALT-INDUCIBLE ZINC FINGER 2, zinc finger (CCCH-type) family protein (.1), zinc finger (CCCH-type) family protein (.2)

>AT2G40140.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 395
EcoRI G|AATTC 52, 103
HindIII A|AGCTT 1510
NcoI C|CATGG 1397
NdeI CA|TATG 1280
PstI CTGCA|G 1406
PvuII CAG|CTG 590, 1403
SalI G|TCGAC 1167
StyI C|C[AT][AT]GG 748, 985, 1397


Click here to view TAIR data

>AT2G40140.1 length:1794
ATGTGCGGTG CAAAGAGCAA CCTTTGCTCA TCTAAAACCC TAACAGAAGT 
50
CGAATTCATG AGGCAGAAAT CAGAAGACGG AGCTTCCGCC ACGTGTCTCC 
100
TCGAATTCGC CGCCTGTGAT GATCTTTCAT CGTTTAAGAG AGAGATCGAA 
150
GAGAATCCAT CGGTGGAGAT TGATGAGTCA GGGTTTTGGT ATTGCAGACG 
200
GGTCGGGTCT AAGAAGATGG GTTTTGAAGA AAGAACACCA CTTATGGTTG 
250
CTGCTATGTA TGGAAGCATG GAAGTGTTGA ATTACATAAT TGCCACAGGA 
300
AGATCCGATG TGAACAGAGT TTGCAGTGAC GAGAAAGTCA CTGCTCTTCA 
350
CTGTGCAGTT TCTGGCTGTT CTGTTTCTAT CGTTGAGATC ATCAAGATCT 
400
TGCTTGATGC TTCTGCTTCA CCTAATTGTG TTGACGCTAA TGGGAACAAA 
450
CCGGTTGATT TGTTGGCTAA AGATTCTCGG TTTGTTCCTA ACCAGAGTAG 
500
AAAGGCGGTT GAGGTTTTAC TGACCGGGAT TCATGGTTCG GTTATGGAAG 
550
AAGAGGAGGA GGAACTGAAG AGTGTTGTGA CTAAGTATCC AGCTGATGCA 
600
TCACTTCCTG ATATTAACGA AGGTGTTTAT GGAACTGATG ATTTTAGGAT 
650
GTTTAGCTTT AAGGTTAAGC CATGTTCTAG GGCTTATTCA CATGATTGGA 
700
CTGAATGTCC TTTTGTTCAT CCTGGTGAGA ATGCAAGGAG GAGAGATCCT 
750
AGGAAGTATC CTTACACTTG TGTGCCTTGT CCCGAGTTTC GTAAAGGGTC 
800
TTGTCCTAAA GGAGATTCGT GTGAGTACGC GCACGGTGTT TTCGAGTCTT 
850
GGCTTCACCC GGCGCAGTAT AGGACACGGC TTTGCAAAGA TGAGACTGGT 
900
TGTGCTAGGA GAGTTTGTTT CTTTGCTCAT AGACGGGATG AGTTAAGACC 
950
GGTTAATGCT TCTACTGGTT CTGCAATGGT TTCACCAAGG TCGTCTAATC 
1000
AGTCTCCTGA GATGTCTGTT ATGTCTCCTT TGACGCTGGG ATCATCGCCA 
1050
ATGAACTCTC CTATGGCTAA TGGTGTTCCT TTGTCTCCAA GAAATGGTGG 
1100
TTTATGGCAG AACAGAGTTA ATAGCCTTAC ACCACCACCG TTGCAGCTTA 
1150
ATGGTAGCAG ATTGAAGTCG ACTTTGAGTG CTAGAGATAT GGATATGGAG 
1200
ATGGAACTTA GGTTTCGCGG TTTGGATAAC CGGAGACTTG GTGATCTCAA 
1250
GCCATCCAAC CTCGAAGAGA CTTTCGGATC ATATGACTCA GCTTCTGTGA 
1300
TGCAACTTCA ATCACCAAGC AGGCATTCTC AGATGAACCA CTATCCGTCT 
1350
TCACCTGTGA GGCAGCCTCC TCCTCATGGA TTCGAATCTT CAGCAGCCAT 
1400
GGCAGCTGCA GTGATGAATG CAAGATCCTC AGCGTTTGCG AAACGCAGCT 
1450
TGAGTTTCAA ACCAGCTCCA GTAGCTTCTA ATGTCTCCGA TTGGGGATCA 
1500
CCAAATGGGA AGCTTGAGTG GGGAATGCAA AGAGATGAGC TGAACAAGTT 
1550
GAGGAGAAGT GCCTCCTTCG GCATTCATGG AAACAACAAC AACAGTGTGT 
1600
CACGCCCTGC TAGAGACTAC AGTGACGAGC CAGATGTGTC GTGGGTGAAC 
1650
TCACTGGTGA AAGAGAATGC ACCAGAGAGA GTGAATGAGA GGGTTGGGAA 
1700
TACGGTGAAT GGTGCAGCGA GTAGAGACAA GTTTAAGCTG CCGTCGTGGG 
1750
CAGAGCAAAT GTATATAGAC CATGAGCAGC AGATTGTGGC ATAA
1800

>AT2G40140.1 longest ORF length:597
MCGAKSNLCS SKTLTEVEFM RQKSEDGASA TCLLEFAACD DLSSFKREIE 
50
ENPSVEIDES GFWYCRRVGS KKMGFEERTP LMVAAMYGSM EVLNYIIATG 
100
RSDVNRVCSD EKVTALHCAV SGCSVSIVEI IKILLDASAS PNCVDANGNK 
150
PVDLLAKDSR FVPNQSRKAV EVLLTGIHGS VMEEEEEELK SVVTKYPADA 
200
SLPDINEGVY GTDDFRMFSF KVKPCSRAYS HDWTECPFVH PGENARRRDP 
250
RKYPYTCVPC PEFRKGSCPK GDSCEYAHGV FESWLHPAQY RTRLCKDETG 
300
CARRVCFFAH RRDELRPVNA STGSAMVSPR SSNQSPEMSV MSPLTLGSSP 
350
MNSPMANGVP LSPRNGGLWQ NRVNSLTPPP LQLNGSRLKS TLSARDMDME 
400
MELRFRGLDN RRLGDLKPSN LEETFGSYDS ASVMQLQSPS RHSQMNHYPS 
450
SPVRQPPPHG FESSAAMAAA VMNARSSAFA KRSLSFKPAP VASNVSDWGS 
500
PNGKLEWGMQ RDELNKLRRS ASFGIHGNNN NSVSRPARDY SDEPDVSWVN 
550
SLVKENAPER VNERVGNTVN GAASRDKFKL PSWAEQMYID HEQQIVA
600