fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G40200 bHLH051 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT2G40200.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 366
EcoRI G|AATTC 6
HindIII A|AGCTT 452, 514, 632


Click here to view TAIR data

>AT2G40200.1 length:765
ATGGAGAATT CTTACGACTC AAGCAAGTGG TCTGATTCTA CAACTCCATA 
50
TATGGTCTCG TGGTCACTAC AATCTGAGTC CTCTGATTCT GATTGGAACC 
100
GGTTTAATCT TGGCTTCTCT TCTTCCTCCT TCGGTGGTAA TTTCCCGGCT 
150
GATGATTGTG TCGGTGGGAT CGAAAAAGCT GAGTCACTTT CAAGAAGCCA 
200
CCGTCTAGCG GAGAAAAGAC GCCGTGACCG GATAAATTCT CACCTCACTG 
250
CTCTCCGGAA ACTTGTCCCC AATTCCGACA AGTTAGACAA AGCAGCTCTA 
300
TTAGCAACAG TGATTGAACA AGTGAAAGAA CTCAAACAAA AAGCAGCAGA 
350
ATCACCAATC TTCCAAGATC TTCCAACAGA AGCAGATGAA GTAACTGTAC 
400
AGCCTGAAAC TATCTCTGAC TTTGAATCAA ACACAAACAC AATCATCTTC 
450
AAAGCTTCTT TTTGCTGCGA AGATCAACCC GAAGCAATCT CAGAGATTAT 
500
TAGAGTTCTC ACAAAGCTTC AACTCGAAAC AATCCAAGCA GAGATAATCT 
550
CTGTTGGGGG AAGAATGAGA ATCAATTTCA TCTTAAAAGA TAGCAACTGC 
600
AATGAGACTA CAAACATAGC TGCTTCAGCA AAAGCTTTGA AGCAATCTCT 
650
CTGCTCTGCG TTAAATCGAA TCACATCTTC TTCTACGACT ACTTCTTCAG 
700
TTTGCAGAAT CAGAAGTAAA AGACAGAGAT GGTTCCTCTC TTCTCATTAT 
750
TCTCACAATG AATAA
800

>AT2G40200.1 longest ORF length:254
MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA 
50
DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL 
100
LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF 
150
KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC 
200
NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY 
250
SHNE
300