Locus |
Common name |
Short description |
AT2G40200 |
bHLH051 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT2G40200.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
366 |
EcoRI
| G|AATTC |
6 |
HindIII
| A|AGCTT |
452, 514, 632 |
Click here to view TAIR data
>AT2G40200.1 length:765
ATGGAGAATT CTTACGACTC AAGCAAGTGG TCTGATTCTA CAACTCCATA | 50 |
TATGGTCTCG TGGTCACTAC AATCTGAGTC CTCTGATTCT GATTGGAACC | 100 |
GGTTTAATCT TGGCTTCTCT TCTTCCTCCT TCGGTGGTAA TTTCCCGGCT | 150 |
GATGATTGTG TCGGTGGGAT CGAAAAAGCT GAGTCACTTT CAAGAAGCCA | 200 |
CCGTCTAGCG GAGAAAAGAC GCCGTGACCG GATAAATTCT CACCTCACTG | 250 |
CTCTCCGGAA ACTTGTCCCC AATTCCGACA AGTTAGACAA AGCAGCTCTA | 300 |
TTAGCAACAG TGATTGAACA AGTGAAAGAA CTCAAACAAA AAGCAGCAGA | 350 |
ATCACCAATC TTCCAAGATC TTCCAACAGA AGCAGATGAA GTAACTGTAC | 400 |
AGCCTGAAAC TATCTCTGAC TTTGAATCAA ACACAAACAC AATCATCTTC | 450 |
AAAGCTTCTT TTTGCTGCGA AGATCAACCC GAAGCAATCT CAGAGATTAT | 500 |
TAGAGTTCTC ACAAAGCTTC AACTCGAAAC AATCCAAGCA GAGATAATCT | 550 |
CTGTTGGGGG AAGAATGAGA ATCAATTTCA TCTTAAAAGA TAGCAACTGC | 600 |
AATGAGACTA CAAACATAGC TGCTTCAGCA AAAGCTTTGA AGCAATCTCT | 650 |
CTGCTCTGCG TTAAATCGAA TCACATCTTC TTCTACGACT ACTTCTTCAG | 700 |
TTTGCAGAAT CAGAAGTAAA AGACAGAGAT GGTTCCTCTC TTCTCATTAT | 750 |
TCTCACAATG AATAA | 800 |
>AT2G40200.1 longest ORF length:254
MENSYDSSKW SDSTTPYMVS WSLQSESSDS DWNRFNLGFS SSSFGGNFPA | 50 |
DDCVGGIEKA ESLSRSHRLA EKRRRDRINS HLTALRKLVP NSDKLDKAAL | 100 |
LATVIEQVKE LKQKAAESPI FQDLPTEADE VTVQPETISD FESNTNTIIF | 150 |
KASFCCEDQP EAISEIIRVL TKLQLETIQA EIISVGGRMR INFILKDSNC | 200 |
NETTNIAASA KALKQSLCSA LNRITSSSTT TSSVCRIRSK RQRWFLSSHY | 250 |
SHNE | 300 |
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