fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G40220 ATABI4, GIN6, SUN6, SIS5, SAN5, ISI3, ABI4 SUCROSE UNCOUPLED 6, SUGAR-INSENSITIVE 5, SALOBRENO 5, IMPAIRED SUCROSE INDUCTION 3, GLUCOSE INSENSITIVE 6, ABA INSENSITIVE 4, Integrase-type DNA-binding superfamily protein (.1)

>AT2G40220.1 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 861
EcoRI G|AATTC 976
SacI GAGCT|C 667


Click here to view TAIR data

>AT2G40220.1 length:987
ATGGACCCTT TAGCTTCCCA ACATCAACAC AACCATCTGG AAGATAATAA 
50
CCAAACCCTA ACCCATAATA ATCCTCAATC CGATTCCACC ACCGACTCAT 
100
CAACTTCCTC CGCTCAACGC AAACGCAAAG GCAAAGGTGG TCCGGACAAC 
150
TCCAAGTTCC GTTACCGTGG CGTTCGACAA AGAAGCTGGG GCAAATGGGT 
200
CGCCGAGATC CGAGAGCCAC GTAAGCGCAC TCGCAAGTGG CTTGGTACTT 
250
TCGCAACCGC CGAAGACGCC GCACGTGCCT ACGACCGGGC TGCCGTTTAC 
300
CTATACGGGT CACGTGCTCA GCTCAACTTA ACCCCTTCGT CTCCTTCCTC 
350
CGTCTCTTCC TCTTCCTCCT CCGTCTCCGC CGCTTCTTCT CCTTCCACCT 
400
CCTCTTCCTC CACTCAAACC CTAAGACCTC TCCTCCCTCG CCCCGCCGCC 
450
GCCACCGTAG GAGGAGGAGC CAACTTTGGT CCGTACGGTA TCCCTTTTAA 
500
CAACAACATC TTCCTTAATG GTGGGACCTC TATGTTATGC CCTAGTTATG 
550
GTTTTTTCCC TCAACAACAA CAACAACAAA ATCAGATGGT CCAGATGGGA 
600
CAATTCCAAC ACCAACAGTA TCAGAATCTT CATTCTAATA CTAACAATAA 
650
CAAGATTTCT GACATCGAGC TCACTGATGT TCCGGTAACT AATTCGACTT 
700
CGTTTCATCA TGAGGTGGCG TTAGGGCAGG AACAAGGAGG AAGTGGGTGT 
750
AATAATAATA GTTCGATGGA GGATTTGAAC TCTCTAGCTG GTTCGGTGGG 
800
TTCGAGTCTA TCAATAACTC ATCCACCGCC GTTGGTTGAT CCGGTATGTT 
850
CTATGGGTCT GGATCCGGGT TATATGGTTG GAGATGGATC TTCGACCATT 
900
TGGCCTTTTG GAGGAGAAGA AGAATATAGT CATAATTGGG GGAGTATTTG 
950
GGATTTTATT GATCCCATCT TGGGGGAATT CTATTAA
1000

>AT2G40220.1 longest ORF length:328
MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN 
50
SKFRYRGVRQ RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY 
100
LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA 
150
ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG 
200
QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC 
250
NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI 
300
WPFGGEEEYS HNWGSIWDFI DPILGEFY
350