fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G40350 DREB2H Integrase-type DNA-binding superfamily protein (.1)

>AT2G40350.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 447
NdeI CA|TATG 296


Click here to view TAIR data

>AT2G40350.1 length:474
ATGCCCAGGA AACGGAAGTC TCGTGGAACA CGAGATGTAG CTGAGATTCT 
50
AAGGAAATGG AGAGAGTACA ATGAGCAGAC CGAGGCAGAT TCTTGCATCG 
100
ATGGTGGTGG TTCAAAACCA ATCCGAAAGG CTCCTCCAAA ACGTTCGAGG 
150
AAGGGTTGTA TGAAAGGTAA AGGTGGACCT GAAAATGGGA TTTGTGACTA 
200
TACAGGAGTT AGACAGAGGA CATGGGGTAA ATGGGTTGCT GAGATCCGTG 
250
AGCCAGGCCG AGGTGCTAAG TTATGGCTCG GTACTTTCTC TAGTTCATAT 
300
GAAGCTGCAT TGGCTTATGA TGAGGCTTCC AAAGCTATTT ACGGTCAGTC 
350
TGCCCGACTC AATCTTCCAC TGCTGCCACT GTGTCAGGCT CGGTTACTGC 
400
ATTTTCTGAT GAATCTGAAG TTTGTGCACG TGAGGATACA AATGCAAGAT 
450
CTGGTTTTGG TCAGGTCAGA CTAG
500

>AT2G40350.1 longest ORF length:157
MPRKRKSRGT RDVAEILRKW REYNEQTEAD SCIDGGGSKP IRKAPPKRSR 
50
KGCMKGKGGP ENGICDYTGV RQRTWGKWVA EIREPGRGAK LWLGTFSSSY 
100
EAALAYDEAS KAIYGQSARL NLPLLPLCQA RLLHFLMNLK FVHVRIQMQD 
150
LVLVRSD
200