Locus |
Common name |
Short description |
AT2G40470 |
ASL11, LBD15 |
ASYMMETRIC LEAVES2-LIKE 11, LOB domain-containing protein 15 (.1) |
>AT2G40470.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, Hpy99I, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, Taqƒ¿I, TliI, Tsp45I, TspRI, Tth111I, XbaI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
301 |
AciI
| C|CGC |
300 |
AflII
| C|TTAAG |
436 |
AluI
| AG|CT |
147, 244, 373, 394, 408, 454 |
AvaII
| G|G[AT]CC |
102 |
BanII
| GPuGCPy|C |
409 |
BfaI
| C|TAG |
246 |
BsaWI
| [AT]|CCGG[AT] |
345 |
BsiEI
| CGPuPy|CG |
416 |
BsiHKAI
| G[AT]GC[AT]|C |
167, 409 |
BslI
| CCNNNNN|NNGG |
99, 351 |
Bsp1286I
| G[GAT]GC[CAT]|C |
167, 409 |
BssKI
| |CCNGG |
108 |
BstF5I
| GGATGNN| |
356 |
BstUI
| CG|CG |
301 |
BstYI
| Pu|GATCPy |
342, 424 |
Cac8I
| GCN|NGC |
142 |
DdeI
| C|TNAG |
280, 336, 371, 629 |
DpnI
| GA-CH3|TC |
40, 341, 423, 469 |
DpnII
| |GATC |
40, 341, 423, 469 |
EaeI
| Py|GGCCPu |
416 |
EagI
| C|GGCCG |
416 |
EcoO109I
| PuG|GNCCPy |
103 |
Fnu4HI
| GC|NGC |
138, 300 |
HaeIII
| GG|CC |
63, 415 |
HhaI
| GCG|C |
154 |
HinP1I
| G|CGC |
154 |
HindIII
| A|AGCTT |
148, 395 |
HinfI
| G|ANTC |
431 |
HpaII
| C|CGG |
108, 344, 495, 510 |
Hpy188I
| TCN|GA |
426 |
HpyCH4IV
| A|CGT |
252, 327 |
HpyCH4V
| TG|CA |
143, 356, 529 |
MboI
| |GATC |
40, 341, 423, 469 |
MseI
| T|TAA |
435, 670 |
MspI
| C|CGG |
108, 344, 495, 510 |
MwoI
| GCNNNNN|NNGC |
300, 372, 402 |
NciI
| CC|[CG]GG |
108 |
NlaIII
| CATG| |
358 |
NlaIV
| GGN|NCC |
102, 112, 364 |
NsiI
| ATGCA|T |
357 |
PpuMI
| PuG|G[AT]CCPy |
103 |
PshAI
| GACNN|NNGTC |
96 |
RsaI
| GT|AC |
275, 349, 439, 473 |
SacI
| GAGCT|C |
409 |
Sau3AI
| |GATC |
40, 341, 423, 469 |
Sau96I
| G|GNCC |
102 |
ScrFI
| CC|NGG |
108 |
SmlI
| C|TPyPuAG |
170, 436 |
TfiI
| G|A[AT]TC |
431 |
TseI
| G|C[AT]GC |
138 |
Tsp509I
| |AATT |
82 |
XcmI
| CCANNNNN|NNNNTGG |
240, 269 |
Click here to view TAIR data
>AT2G40470.1 length:675
ATGTCAAGAG AAAGGGAGAG ATTTGAAGAG ATAGGGAAGA AGATCAAAAG | 50 |
AGAAGCAGAT GCTTGGCCTC ATCAAATGGC TGGAATTAGA AGACCAATGT | 100 |
CGGGTCCTCC CGGAACCCTC AATACCATTA CGCCTTGTGC TGCCTGCAAG | 150 |
CTTTTGCGCC GTAGATGTGC TCAAGAATGT CCCTTTTCGC CATATTTCTC | 200 |
CCCACACGAG CCTCATAAGT TCGCTTCCGT CCACAAAGTC TTTGGAGCTA | 250 |
GTAACGTCTC CAAGATGCTA ATGGAAGTAC CTGAGAGCCA GAGAGCAGAT | 300 |
GCCGCGAATA GCCTTGTGTA TGAAGCAAAC GTGAGGCTAA GAGATCCGGT | 350 |
GTACGGATGC ATGGGAGCCA TCTCAGCTCT ACAACAACAA GTCCAAGCTT | 400 |
TACAAGCCGA GCTCACGGCC GTAAGATCCG AGATTCTTAA GTACAAGCAA | 450 |
CGAGAAGCTG TCGCCACTTT GATCGTACCT TCCAACTCCC AAGTTGCCGG | 500 |
ATTTCACAAC TCCGGCGGTG TTTCCGTCAT TGCACCACCA CCACAAAGAC | 550 |
CAACAACTCC ACCACAACCT ACAACGGCTC ATCCTCCTTC TCCATCTTCT | 600 |
TGTGTTTTCT CTCAACCAAC CACAAGAGAC TTAGAATACG GCAACATTGA | 650 |
AAGTGAGAAC AACTACTTCG GTTAA | 700 |
>AT2G40470.1 longest ORF length:224
MSRERERFEE IGKKIKREAD AWPHQMAGIR RPMSGPPGTL NTITPCAACK | 50 |
LLRRRCAQEC PFSPYFSPHE PHKFASVHKV FGASNVSKML MEVPESQRAD | 100 |
AANSLVYEAN VRLRDPVYGC MGAISALQQQ VQALQAELTA VRSEILKYKQ | 150 |
REAVATLIVP SNSQVAGFHN SGGVSVIAPP PQRPTTPPQP TTAHPPSPSS | 200 |
CVFSQPTTRD LEYGNIESEN NYFG | 250 |
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