fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G40970 MYBC1 Homeodomain-like superfamily protein (.1)

>AT2G40970.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 234
HindIII A|AGCTT 175
NheI G|CTAGC 562


Click here to view TAIR data

>AT2G40970.1 length:747
ATGAGAGAAG ATAATCCAAA TTGGTTCCTT AGATGGGAAG AAGAGCTTCC 
50
ATCTCCAGAA GAACTCATCC CTATCTCTCA AACCTTAATC ACTCCTCATC 
100
TAGCTCTCGC TTTCCAAATC GGAAGTCCTA ATCATCATCT CGGATCAAAG 
150
AGAACCACCG CGATTTATCA CCAGAAGCTT CAATCCTCCA CCACTCCAAC 
200
AACTCCAACT CCAACTCCTC CACCGATGAT GATGAATTCT GATTTCGGCG 
250
GTGGCGATTC CACGGATCTT GGTTCAGGAT CAATAGGAGG AGAGCCAGCA 
300
AGAACGTTGA AACGGCCGCG TCTAGTGTGG ACGCCTCAGC TACACAAACG 
350
TTTCGTGGAT GCGGTTGGAC ACTTAGGGAT CAAAAACGCA GTTCCAAAGA 
400
CTATAATGCA GCTTATGAGC GTTGAAGGAT TGACTAGAGA GAACGTTGCG 
450
AGTCATCTTC AGAAATATCG TCTTTACCTT AGGAGAATGC AAGGCGGGAA 
500
CGGTAACGGA ATCACTGGAG GACACGTCAT CGTCTCTGAT TCGGCTACTG 
550
ATCGGCTATT TGCTAGCTCA CCGGTTCCAG CTCATTTCTT GAGCCCGGAT 
600
TACTTGATGC CGCCATTAGA GCATTCGTAT ATGGGGAAAC ATGTGATTAC 
650
GCAGCAAAAC CAAGTGGTTC GTAATCTGAG GTATGAAGAT TCGGAATATG 
700
GTCATGGTAG TATGAAGATG CTTAAGCTCT TCCCTGCCGG AAATTAA
750

>AT2G40970.1 longest ORF length:248
MREDNPNWFL RWEEELPSPE ELIPISQTLI TPHLALAFQI GSPNHHLGSK 
50
RTTAIYHQKL QSSTTPTTPT PTPPPMMMNS DFGGGDSTDL GSGSIGGEPA 
100
RTLKRPRLVW TPQLHKRFVD AVGHLGIKNA VPKTIMQLMS VEGLTRENVA 
150
SHLQKYRLYL RRMQGGNGNG ITGGHVIVSD SATDRLFASS PVPAHFLSPD 
200
YLMPPLEHSY MGKHVITQQN QVVRNLRYED SEYGHGSMKM LKLFPAGN
250