fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G41130 bHLH106 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT2G41130.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 489
HindIII A|AGCTT 262
SalI G|TCGAC 126


Click here to view TAIR data

>AT2G41130.1 length:762
ATGCAACCAG AGACCTCAGA TCAGATGTTG TACTCGTTTC TTGCCGGAAA 
50
CGAAGTCGGC GGTGGAGGGT ACTGCGTCTC CGGCGACTAC ATGACGACTA 
100
TGCAGAGCTT ATGTGGGTCT TCGTCGTCGA CGTCATCGTA TTACCCACTG 
150
GCGATCTCCG GCATCGGAGA AACGATGGCT CAAGACAGAG CTTTAGCTGC 
200
TTTGAGGAAC CACAAAGAAG CTGAGAGAAG AAGGAGAGAG AGGATCAATT 
250
CTCATCTCAA CAAGCTTCGT AACGTACTCT CTTGTAATTC TAAGACCGAT 
300
AAAGCCACAC TGCTCGCCAA AGTAGTTCAA CGAGTCAGAG AACTTAAACA 
350
GCAAACCCTA GAGACCTCCG ACTCCGACCA AACATTATTA CCATCAGAGA 
400
CCGACGAAAT TAGTGTTCTA CACTTTGGAG ACTATTCAAA CGACGGTCAT 
450
ATAATCTTCA AAGCCTCTCT ATGTTGTGAA GATAGATCAG ATCTCTTGCC 
500
GGACCTTATG GAGATTCTCA AGTCTCTTAA CATGAAGACT CTCCGAGCTG 
550
AGATGGTAAC CATTGGTGGT CGGACAAGAA GTGTTCTTGT CGTAGCTGCT 
600
GACAAAGAGA TGCACGGCGT CGAGTCTGTG CATTTTTTGC AAAATGCTCT 
650
CAAGTCGCTG CTTGAGCGGT CAAGCAAGTC GTTGATGGAA CGTAGTTCTG 
700
GTGGTGGAGG AGGAGAACGG TCAAAGCGGC GTCGTGCGCT GGATCACATC 
750
ATAATGGTGT GA
800

>AT2G41130.1 longest ORF length:253
MQPETSDQML YSFLAGNEVG GGGYCVSGDY MTTMQSLCGS SSSTSSYYPL 
50
AISGIGETMA QDRALAALRN HKEAERRRRE RINSHLNKLR NVLSCNSKTD 
100
KATLLAKVVQ RVRELKQQTL ETSDSDQTLL PSETDEISVL HFGDYSNDGH 
150
IIFKASLCCE DRSDLLPDLM EILKSLNMKT LRAEMVTIGG RTRSVLVVAA 
200
DKEMHGVESV HFLQNALKSL LERSSKSLME RSSGGGGGER SKRRRALDHI 
250
IMV
300