Locus |
Common name |
Short description |
AT2G41240 |
bHLH100 |
basic helix-loop-helix protein 100 (.1.2) |
>AT2G41240.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
405 |
EcoRI
| G|AATTC |
663 |
HindIII
| A|AGCTT |
187 |
SacI
| GAGCT|C |
376 |
SalI
| G|TCGAC |
462 |
Click here to view TAIR data
>AT2G41240.1 length:729
ATGTGTGCAC TTGTCCCTCC ATTATATCCC AATTTCGGCT GGCCTTGCGG | 50 |
AGATCATAGC TTCTATGAAA CCGACGACGT ATCCAACACG TTTCTTGATT | 100 |
TTCCGTTGCC GGACTTGACG GTGACTCATG AGAATGTGTC GTCTGAGAAT | 150 |
AACAGAACAT TACTAGACAA TCCCGTGGTG ATGAAGAAGC TTAATCACAA | 200 |
CGCGAGTGAA CGTGAGCGTC GCAAGAAGAT CAACACAATG TTCTCATCTC | 250 |
TTCGTTCTTG TCTTCCTCCC ACCAATCAAA CGAAGAAGTT AAGTGTTTCG | 300 |
GCAACAGTTT CACAAGCATT GAAGTACATA CCAGAGCTGC AAGAGCAAGT | 350 |
TAAAAAGCTC ATGAAGAAGA AAGAAGAGCT CTCGTTTCAA ATTTCGGGTC | 400 |
AAAGAGATCT CGTTTACACC GACCAAAACA GTAAGTCAGA GGAAGGGGTT | 450 |
ACAAGCTATG CGTCGACAGT TTCTTCGACT AGGCTCAGTG AGACTGAAGT | 500 |
GATGGTCCAA ATTTCATCGT TACAGACTGA AAAATGTTCG TTTGGGAATG | 550 |
TCTTGAGTGG TGTAGAAGAA GATGGGTTGG TTCTTGTGGG TGCTTCATCT | 600 |
TCAAGGTCTC ATGGAGAGCG ACTCTTTTAC TCTATGCATC TTCAGATAAA | 650 |
AAATGGCCAG GTGAATTCCG AAGAATTAGG TGATAGATTG TTGTACTTGT | 700 |
ACGAGAAATG TGGACACTCG TTTACATGA | 750 |
>AT2G41240.1 longest ORF length:242
MCALVPPLYP NFGWPCGDHS FYETDDVSNT FLDFPLPDLT VTHENVSSEN | 50 |
NRTLLDNPVV MKKLNHNASE RERRKKINTM FSSLRSCLPP TNQTKKLSVS | 100 |
ATVSQALKYI PELQEQVKKL MKKKEELSFQ ISGQRDLVYT DQNSKSEEGV | 150 |
TSYASTVSST RLSETEVMVQ ISSLQTEKCS FGNVLSGVEE DGLVLVGASS | 200 |
SRSHGERLFY SMHLQIKNGQ VNSEELGDRL LYLYEKCGHS FT | 250 |
|