fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G41240 bHLH100 basic helix-loop-helix protein 100 (.1.2)

>AT2G41240.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 405
EcoRI G|AATTC 663
HindIII A|AGCTT 187
SacI GAGCT|C 376
SalI G|TCGAC 462


Click here to view TAIR data

>AT2G41240.1 length:729
ATGTGTGCAC TTGTCCCTCC ATTATATCCC AATTTCGGCT GGCCTTGCGG 
50
AGATCATAGC TTCTATGAAA CCGACGACGT ATCCAACACG TTTCTTGATT 
100
TTCCGTTGCC GGACTTGACG GTGACTCATG AGAATGTGTC GTCTGAGAAT 
150
AACAGAACAT TACTAGACAA TCCCGTGGTG ATGAAGAAGC TTAATCACAA 
200
CGCGAGTGAA CGTGAGCGTC GCAAGAAGAT CAACACAATG TTCTCATCTC 
250
TTCGTTCTTG TCTTCCTCCC ACCAATCAAA CGAAGAAGTT AAGTGTTTCG 
300
GCAACAGTTT CACAAGCATT GAAGTACATA CCAGAGCTGC AAGAGCAAGT 
350
TAAAAAGCTC ATGAAGAAGA AAGAAGAGCT CTCGTTTCAA ATTTCGGGTC 
400
AAAGAGATCT CGTTTACACC GACCAAAACA GTAAGTCAGA GGAAGGGGTT 
450
ACAAGCTATG CGTCGACAGT TTCTTCGACT AGGCTCAGTG AGACTGAAGT 
500
GATGGTCCAA ATTTCATCGT TACAGACTGA AAAATGTTCG TTTGGGAATG 
550
TCTTGAGTGG TGTAGAAGAA GATGGGTTGG TTCTTGTGGG TGCTTCATCT 
600
TCAAGGTCTC ATGGAGAGCG ACTCTTTTAC TCTATGCATC TTCAGATAAA 
650
AAATGGCCAG GTGAATTCCG AAGAATTAGG TGATAGATTG TTGTACTTGT 
700
ACGAGAAATG TGGACACTCG TTTACATGA
750

>AT2G41240.1 longest ORF length:242
MCALVPPLYP NFGWPCGDHS FYETDDVSNT FLDFPLPDLT VTHENVSSEN 
50
NRTLLDNPVV MKKLNHNASE RERRKKINTM FSSLRSCLPP TNQTKKLSVS 
100
ATVSQALKYI PELQEQVKKL MKKKEELSFQ ISGQRDLVYT DQNSKSEEGV 
150
TSYASTVSST RLSETEVMVQ ISSLQTEKCS FGNVLSGVEE DGLVLVGASS 
200
SRSHGERLFY SMHLQIKNGQ VNSEELGDRL LYLYEKCGHS FT
250