fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G41240 bHLH100 basic helix-loop-helix protein 100 (.1.2)

>AT2G41240.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 402
EcoRI G|AATTC 660
HindIII A|AGCTT 187
SacI GAGCT|C 373
SalI G|TCGAC 459


Click here to view TAIR data

>AT2G41240.2 length:726
ATGTGTGCAC TTGTCCCTCC ATTATATCCC AATTTCGGCT GGCCTTGCGG 
50
AGATCATAGC TTCTATGAAA CCGACGACGT ATCCAACACG TTTCTTGATT 
100
TTCCGTTGCC GGACTTGACG GTGACTCATG AGAATGTGTC GTCTGAGAAT 
150
AACAGAACAT TACTAGACAA TCCCGTGGTG ATGAAGAAGC TTAATCACAA 
200
CGCGAGTGAA CGTGAGCGTC GCAAGAAGAT CAACACAATG TTCTCATCTC 
250
TTCGTTCTTG TCTTCCTCCC ACCAATCAAA CGAAGTTAAG TGTTTCGGCA 
300
ACAGTTTCAC AAGCATTGAA GTACATACCA GAGCTGCAAG AGCAAGTTAA 
350
AAAGCTCATG AAGAAGAAAG AAGAGCTCTC GTTTCAAATT TCGGGTCAAA 
400
GAGATCTCGT TTACACCGAC CAAAACAGTA AGTCAGAGGA AGGGGTTACA 
450
AGCTATGCGT CGACAGTTTC TTCGACTAGG CTCAGTGAGA CTGAAGTGAT 
500
GGTCCAAATT TCATCGTTAC AGACTGAAAA ATGTTCGTTT GGGAATGTCT 
550
TGAGTGGTGT AGAAGAAGAT GGGTTGGTTC TTGTGGGTGC TTCATCTTCA 
600
AGGTCTCATG GAGAGCGACT CTTTTACTCT ATGCATCTTC AGATAAAAAA 
650
TGGCCAGGTG AATTCCGAAG AATTAGGTGA TAGATTGTTG TACTTGTACG 
700
AGAAATGTGG ACACTCGTTT ACATGA
750

>AT2G41240.2 longest ORF length:241
MCALVPPLYP NFGWPCGDHS FYETDDVSNT FLDFPLPDLT VTHENVSSEN 
50
NRTLLDNPVV MKKLNHNASE RERRKKINTM FSSLRSCLPP TNQTKLSVSA 
100
TVSQALKYIP ELQEQVKKLM KKKEELSFQI SGQRDLVYTD QNSKSEEGVT 
150
SYASTVSSTR LSETEVMVQI SSLQTEKCSF GNVLSGVEED GLVLVGASSS 
200
RSHGERLFYS MHLQIKNGQV NSEELGDRLL YLYEKCGHSF T
250