Locus |
Common name |
Short description |
AT2G41240 |
bHLH100 |
basic helix-loop-helix protein 100 (.1.2) |
>AT2G41240.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
402 |
EcoRI
| G|AATTC |
660 |
HindIII
| A|AGCTT |
187 |
SacI
| GAGCT|C |
373 |
SalI
| G|TCGAC |
459 |
Click here to view TAIR data
>AT2G41240.2 length:726
ATGTGTGCAC TTGTCCCTCC ATTATATCCC AATTTCGGCT GGCCTTGCGG | 50 |
AGATCATAGC TTCTATGAAA CCGACGACGT ATCCAACACG TTTCTTGATT | 100 |
TTCCGTTGCC GGACTTGACG GTGACTCATG AGAATGTGTC GTCTGAGAAT | 150 |
AACAGAACAT TACTAGACAA TCCCGTGGTG ATGAAGAAGC TTAATCACAA | 200 |
CGCGAGTGAA CGTGAGCGTC GCAAGAAGAT CAACACAATG TTCTCATCTC | 250 |
TTCGTTCTTG TCTTCCTCCC ACCAATCAAA CGAAGTTAAG TGTTTCGGCA | 300 |
ACAGTTTCAC AAGCATTGAA GTACATACCA GAGCTGCAAG AGCAAGTTAA | 350 |
AAAGCTCATG AAGAAGAAAG AAGAGCTCTC GTTTCAAATT TCGGGTCAAA | 400 |
GAGATCTCGT TTACACCGAC CAAAACAGTA AGTCAGAGGA AGGGGTTACA | 450 |
AGCTATGCGT CGACAGTTTC TTCGACTAGG CTCAGTGAGA CTGAAGTGAT | 500 |
GGTCCAAATT TCATCGTTAC AGACTGAAAA ATGTTCGTTT GGGAATGTCT | 550 |
TGAGTGGTGT AGAAGAAGAT GGGTTGGTTC TTGTGGGTGC TTCATCTTCA | 600 |
AGGTCTCATG GAGAGCGACT CTTTTACTCT ATGCATCTTC AGATAAAAAA | 650 |
TGGCCAGGTG AATTCCGAAG AATTAGGTGA TAGATTGTTG TACTTGTACG | 700 |
AGAAATGTGG ACACTCGTTT ACATGA | 750 |
>AT2G41240.2 longest ORF length:241
MCALVPPLYP NFGWPCGDHS FYETDDVSNT FLDFPLPDLT VTHENVSSEN | 50 |
NRTLLDNPVV MKKLNHNASE RERRKKINTM FSSLRSCLPP TNQTKLSVSA | 100 |
TVSQALKYIP ELQEQVKKLM KKKEELSFQI SGQRDLVYTD QNSKSEEGVT | 150 |
SYASTVSSTR LSETEVMVQI SSLQTEKCSF GNVLSGVEED GLVLVGASSS | 200 |
RSHGERLFYS MHLQIKNGQV NSEELGDRLL YLYEKCGHSF T | 250 |
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