fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G41690 AT-HSFB3, HSFB3 HEAT SHOCK TRANSCRIPTION FACTOR B3, heat shock transcription factor B3 (.1)

>AT2G41690.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 150
BglII A|GATCT 231
EcoRI G|AATTC 220
HpaI GTT|AAC 40


Click here to view TAIR data

>AT2G41690.1 length:735
ATGGAAGATG CTGGTGAACA TTTACGGTGT AACGATAACG TTAACGACGA 
50
GGAGCGTTTG CCATTGGAGT TTATGATCGG AAACTCAACA TCCACGGCGG 
100
AGCTACAGCC GCCTCCACCG TTCTTGGTAA AGACATACAA AGTGGTGGAG 
150
GATCCGACGA CGGACGGGGT TATATCTTGG AACGAATACG GAACTGGTTT 
200
CGTCGTGTGG CAGCCGGCAG AATTCGCTAG AGATCTGTTA CCAACACTTT 
250
TCAAGCATTG CAACTTCTCT AGCTTCGTTC GCCAGCTCAA TACTTACGGT 
300
TTTCGAAAAG TAACGACGAT AAGATGGGAA TTTAGTAATG AGATGTTTCG 
350
AAAGGGGCAA AGAGAGCTTA TGAGCAATAT CCGAAGAAGG AAGAGCCAAC 
400
ATTGGTCACA CAACAAGTCT AATCACCAGG TTGTACCAAC AACAACGATG 
450
GTGAATCAAG AAGGTCATCA ACGGATTGGG ATTGATCATC ACCATGAGGA 
500
TCAACAGTCT TCCGCCACTT CATCCTCTTT CGTATACACT GCATTACTCG 
550
ACGAAAACAA ATGCTTGAAG AATGAAAACG AGTTATTAAG CTGCGAACTT 
600
GGGAAAACCA AGAAGAAATG CAAGCAGCTT ATGGAGTTGG TGGAGAGATA 
650
CAGAGGAGAA GACGAAGATG CAACTGATGA AAGTGATGAT GAAGAAGATG 
700
AAGGGCTTAA GTTGTTCGGA GTAAAACTTG AATGA
750

>AT2G41690.1 longest ORF length:244
MEDAGEHLRC NDNVNDEERL PLEFMIGNST STAELQPPPP FLVKTYKVVE 
50
DPTTDGVISW NEYGTGFVVW QPAEFARDLL PTLFKHCNFS SFVRQLNTYG 
100
FRKVTTIRWE FSNEMFRKGQ RELMSNIRRR KSQHWSHNKS NHQVVPTTTM 
150
VNQEGHQRIG IDHHHEDQQS SATSSSFVYT ALLDENKCLK NENELLSCEL 
200
GKTKKKCKQL MELVERYRGE DEDATDESDD EEDEGLKLFG VKLE
250