fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G41940 ZFP8 zinc finger protein 8 (.1)

>AT2G41940.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 133, 207
StyI C|C[AT][AT]GG 327


Click here to view TAIR data

>AT2G41940.1 length:774
ATGGACGAAA CCAACGGACG AAGAGAAACT CACGATTTCA TGAACGTCAA 
50
CGTTGAATCC TTCTCTCAGC TTCCTTTCAT CCGCCGTACT CCTCCCAAAG 
100
AAAAAGCCGC CATTATTCGT CTCTTCGGCC AAGAGCTCGT CGGTGATAAC 
150
TCCGACAACT TATCCGCAGA ACCTTCTGAT CATCAAACCA CTACCAAGAA 
200
CGATGAGAGC TCTGAGAATA TCAAGGACAA AGACAAAGAA AAAGATAAGG 
250
ACAAAGACAA AGATAACAAC AACAACAGGA GATTCGAGTG TCACTACTGC 
300
TTCAGAAACT TCCCAACTTC TCAAGCCCTA GGTGGACATC AAAACGCTCA 
350
CAAACGTGAA CGTCAACACG CCAAACGCGG TTCCATGACA TCATACCTTC 
400
ATCATCATCA GCCTCATGAC CCTCACCACA TCTACGGCTT CCTCAACAAC 
450
CACCACCACC GTCACTATCC GTCTTGGACG ACGGAAGCTA GATCATACTA 
500
CGGCGGAGGG GGACATCAAA CGCCGTCGTA CTACTCAAGG AATACTCTTG 
550
CTCCTCCTTC TTCTAACCCA CCGACAATCA ACGGAAGTCC TTTAGGTTTG 
600
TGGCGTGTAC CGCCTTCCAC GTCAACAAAT ACTATTCAAG GCGTTTACTC 
650
ATCTTCACCA GCTTCAGCGT TTAGGTCGCA TGAGCAAGAG ACTAATAAGG 
700
AGCCTAATAA CTGGCCGTAC AGATTGATGA AACCCAATGT GCAAGATCAT 
750
GTGAGTCTCG ATCTTCATCT CTGA
800

>AT2G41940.1 longest ORF length:257
MDETNGRRET HDFMNVNVES FSQLPFIRRT PPKEKAAIIR LFGQELVGDN 
50
SDNLSAEPSD HQTTTKNDES SENIKDKDKE KDKDKDKDNN NNRRFECHYC 
100
FRNFPTSQAL GGHQNAHKRE RQHAKRGSMT SYLHHHQPHD PHHIYGFLNN 
150
HHHRHYPSWT TEARSYYGGG GHQTPSYYSR NTLAPPSSNP PTINGSPLGL 
200
WRVPPSTSTN TIQGVYSSSP ASAFRSHEQE TNKEPNNWPY RLMKPNVQDH 
250
VSLDLHL
300