Locus |
Common name |
Short description |
AT2G42280 |
bHLH130 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2) |
>AT2G42280.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
168 |
HpaI
| GTT|AAC |
160, 210 |
SacI
| GAGCT|C |
72, 698 |
Click here to view TAIR data
>AT2G42280.2 length:903
ATGGATTCAA ATAATCATCT CTACGACCCG AATCCCACCG GGTCGGGTCT | 50 |
TCTTCGTTTT AGATCAGCTC CGAGCTCTGT TCTCGCCGCT TTTGTTGACG | 100 |
ACGACAAGAT TGGTTTCGAC TCCGATAGGT TGCTTTCAAG ATTCGTGACC | 150 |
TCTAATGGCG TTAACGGAGA TCTGGGTTCA CCTAAATTCG AGGATAAGTC | 200 |
TCCGGTTTCG TTAACGAACA CCTCTGTTTC ATACGCCGCC ACTCTGCCGC | 250 |
CACCGCCGCA GCTTGAGCCG TCGAGTTTTC TGGGTTTGCC GCCGCATTAC | 300 |
CCGAGGCAGA GTAAAGGGAT AATGAACTCG GTTGGTTTGG ATCAGTTTCT | 350 |
CGGTATCAAT AATCATCACA CCAAACCAGT TGAATCTAAT CTTCTCCGTC | 400 |
AAAGCAGCTC TCCAGCCGGA ATGTTTACTA ATCTCTCTGA CCAAAACGGT | 450 |
TATGGTTCAA TGAGGAATTT GATGAATTAC GAAGAAGATG AAGAGAGTCC | 500 |
ATCTAATTCC AATGGATTAA GACGCCATTG CAGTCTCTCT TCAAGGCCAC | 550 |
CTTCTTCACT TGGAATGCTT TCTCAAATAC CTGAAATCGC ACCCGAAACT | 600 |
AATTTTCCAT ATAGCCATTG GAATGATCCA TCCAGCTTTA TTGATAACTT | 650 |
ATCCTCACTT AAAAGAGAAG CCGAGGACGA TGGAAAATTG TTTCTCGGAG | 700 |
CTCAGAACGG AGAGTCCGGG AATCGTATGC AGTTACTGTC GCATCATTTG | 750 |
AGCCTACCAA AGTCATCATC GACAGCCTCG GACATGGTTT CAGTGGATAA | 800 |
GTATCTTCAG CTACAAGATT CTGTTCCTTG TAAAATCAGA GCCAAACGTG | 850 |
GTTGCGCTAC ACATCCTCGA AGCATCGCTG AACGGGTAAC TTCACCTAGT | 900 |
TAA | 950 |
>AT2G42280.2 longest ORF length:300
MDSNNHLYDP NPTGSGLLRF RSAPSSVLAA FVDDDKIGFD SDRLLSRFVT | 50 |
SNGVNGDLGS PKFEDKSPVS LTNTSVSYAA TLPPPPQLEP SSFLGLPPHY | 100 |
PRQSKGIMNS VGLDQFLGIN NHHTKPVESN LLRQSSSPAG MFTNLSDQNG | 150 |
YGSMRNLMNY EEDEESPSNS NGLRRHCSLS SRPPSSLGML SQIPEIAPET | 200 |
NFPYSHWNDP SSFIDNLSSL KREAEDDGKL FLGAQNGESG NRMQLLSHHL | 250 |
SLPKSSSTAS DMVSVDKYLQ LQDSVPCKIR AKRGCATHPR SIAERVTSPS | 300 |
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