|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT2G42380 | ATBZIP34 | Basic-leucine zipper (bZIP) transcription factor family protein (.1), Basic-leucine zipper (bZIP) transcription factor family protein (.2) |
>AT2G42380.2 CDS map
>>Show genomic map
Uncut enzymes: AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| ApaI | GGGCC|C | 349 |
| EcoRI | G|AATTC | 145 |
| HindIII | A|AGCTT | 778 |
| SacI | GAGCT|C | 637 |
| SalI | G|TCGAC | 139, 916 |
Click here to view TAIR data
>AT2G42380.2 length:966
ATGGCACAAC TCCCTCCTAA AATCCCCAAC ATGACACAAC ATTGGCCTGA | 50 |
TTTCTCTTCC CAAAAGCTCT CTCCTTTCTC TACCCCAACC GCAACCGCTG | 100 |
TCGCCACCGC TACAACCACC GTACAAAACC CCTCATGGGT CGACGAATTC | 150 |
CTCGACTTCT CAGCGTCTCG CCGTGGCAAC CACCGTCGTT CCATCAGCGA | 200 |
CTCTATCGCA TTCCTCGAAG CTCCAACAGT CAGCATCGAA GACCACCAAT | 250 |
TCGACAGGTT CGATGACGAA CAGTTCATGT CGATGTTCAC CGACGACGAC | 300 |
AACCTTCATA GCAATCCTTC CCATATCAAC AACAAAAATA ACAATGTGGG | 350 |
GCCCACGGGA TCTTCCTCGA ACACATCCAC GCCGTCCAAT AGCTTCAACG | 400 |
ACGATAACAA AGAATTACCA CCGTCCGATC ATAACATGAA CAATAATATC | 450 |
AACAACAACT ATAACGATGA AGTCCAAAGC CAATGCAAGA TGGAGCCAGA | 500 |
AGATGGTACG GCGTCGAATA ACAATTCCGG TGATAGCTCC GGCAACCGGA | 550 |
TTCTCGATCC CAAAAGGGTT AAGAGAATAT TAGCAAATCG GCAATCAGCA | 600 |
CAGAGATCAA GGGTGAGGAA ACTGCAATAC ATATCAGAGC TCGAACGTAG | 650 |
CGTCACTTCG TTGCAGGCGG AAGTGTCAGT GTTATCGCCA AGAGTTGCAT | 700 |
TCTTGGATCA TCAACGTTTG CTTCTTAACG TTGACAACAG CGCTCTCAAG | 750 |
CAACGAATCG CTGCTTTATC TCAAGACAAG CTTTTCAAAG ACGCACATCA | 800 |
AGAAGCATTG AAGAGAGAAA TAGAGAGACT TCGACAAGTG TATAATCAAC | 850 |
AAAGCCTCAC GAATGTGGAA AATGCAAATC ATTTATCGGC GACCGGAGCC | 900 |
GGTGCTACTC CGGCCGTCGA CATCAAGTCG TCCGTTGAAA CAGAGCAGCT | 950 |
CCTCAATGTC TCATAA | 1000 |
>AT2G42380.2 longest ORF length:321
MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF | 50 |
LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD | 100 |
NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI | 150 |
NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA | 200 |
QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK | 250 |
QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA | 300 |
GATPAVDIKS SVETEQLLNV S | 350 |