fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G42400 ATVOZ2, VOZ2 vascular plant one zinc finger protein 2 (.1)

>AT2G42400.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 884, 1128
BglII A|GATCT 1114
HindIII A|AGCTT 330, 595
HpaI GTT|AAC 907
KpnI GGTAC|C 731
NcoI C|CATGG 756, 922
NdeI CA|TATG 1010
PstI CTGCA|G 744, 1279
SpeI A|CTAGT 274
StyI C|C[AT][AT]GG 756, 922


Click here to view TAIR data

>AT2G42400.1 length:1353
ATGTCAAACC ACCCGAAGAT CACATCGGCG CATCAGAATG TGGAGGAGAA 
50
GCTAAGGGAA CTTCAGGAGA GGTTCTGTCA TCTTCAAGCT GCTAGGAAAG 
100
AAGGGCGGCA TGGTGACCTT GCGCTTTTAG AAGCCCAAAT CTCTCAGAAT 
150
ATTCGGGAGT GGCAAGCTGA ACTCACTGCT CCTTCTCCTG AATCTTCTCT 
200
GTTGGGTGAA GGTATTAGCC AATTCCTTGA GGAGTTTGCT CCTCTGTTGA 
250
AATTAGACGA GGAGGATGAT GCAACTAGTA CGCTAAAAGA ACATGCTGGA 
300
GCAAAGCCTG ATCCTGAGGG TTTTTCTCAA AGCTTGTGCC CTCCTGAATG 
350
GACATCTGAG AATTTTAGTC AAAGTCCTTT CAACGGAAAT TTCTCCTGCG 
400
GCTTTGAGGA TGCTCTTAAT AGCACAGAAA CACATGGCCA GCAACTCCAT 
450
TATGGATATG AAGGGTTTGA TCCAAGCATA AACTCCGCTC CTGATTTCCA 
500
TGACCAAAAA CTCAGCAGCA ACTTGGATAT AACTTCTCAG TATGATTATA 
550
TTTTCTCCGA AGTGCGTCAG GAACTAGATA ACAGCCCTTC CACTAAGCTT 
600
GATTCTTCTG AAGAGATTGA CAACTTTGCT GAATTTTCTA CTCCATCAAG 
650
TGTCCGTGTG CCTCCATCTG CTTTTCTGGG ACCTAAGTGT GCACTATGGG 
700
ATTGCACAAG GCCTGCTCAG GGCTCCGAGT GGTACCTGGA TTACTGCAGT 
750
AACTACCATG GGACTCTAGC TCTGAATGAA GATTCGCCTG GCACAGCACC 
800
TGTATTGAGG CCAGGGGGCA TCAGTTTGAA AGATAATCTA TTGATTGATG 
850
CTCTTCGTGC AAAGACTCAG GGTAAGAATG TTGGGATCCC AGTGTGTGAA 
900
GGAGCTGTTA ACACAAAATG CCCATGGAAC GCAGCAGAGC TATTTCATCT 
950
TGAACTGGTT GAAGGCGAAA CAATTAGAGA GTGGCTCTTC TTTGACAAAC 
1000
CTAGAAGAGC ATATGATAGC GGAAACCGAA AGCAAAGATC ACTTCCAGAT 
1050
TACAGTGGAA GAGGTTGGCA TGAATCAAGA AAACAACTGA TGAAGGAACA 
1100
AGAAGGCCAG AAGAGATCTT ACTATATGGA TCCACAACCT CCAGGTCCCT 
1150
TTGAGTGGCA TCTCTTTGAA TACCAAATCA ATGAATCTGA CGCATGTGCG 
1200
TTATATCGCC TAGAACTTAA AGTAGGAAAT GGAAAGAAGA GTCCTAAGGG 
1250
AAAGATTTCA AAAGACCCTC TGGCTGATCT GCAGAAGAAG ATGGGACAGT 
1300
TTAAAGTGGC TTCAGACAAA CCCTCTCCTC CAACCAAAGG TCGTAAGGAG 
1350
TGA
1400

>AT2G42400.1 longest ORF length:450
MSNHPKITSA HQNVEEKLRE LQERFCHLQA ARKEGRHGDL ALLEAQISQN 
50
IREWQAELTA PSPESSLLGE GISQFLEEFA PLLKLDEEDD ATSTLKEHAG 
100
AKPDPEGFSQ SLCPPEWTSE NFSQSPFNGN FSCGFEDALN STETHGQQLH 
150
YGYEGFDPSI NSAPDFHDQK LSSNLDITSQ YDYIFSEVRQ ELDNSPSTKL 
200
DSSEEIDNFA EFSTPSSVRV PPSAFLGPKC ALWDCTRPAQ GSEWYLDYCS 
250
NYHGTLALNE DSPGTAPVLR PGGISLKDNL LIDALRAKTQ GKNVGIPVCE 
300
GAVNTKCPWN AAELFHLELV EGETIREWLF FDKPRRAYDS GNRKQRSLPD 
350
YSGRGWHESR KQLMKEQEGQ KRSYYMDPQP PGPFEWHLFE YQINESDACA 
400
LYRLELKVGN GKKSPKGKIS KDPLADLQKK MGQFKVASDK PSPPTKGRKE 
450