fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G42410 ATZFP11, ZFP11 zinc finger protein 11 (.1)

>AT2G42410.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 175
NcoI C|CATGG 127
PstI CTGCA|G 159
StyI C|C[AT][AT]GG 127


Click here to view TAIR data

>AT2G42410.1 length:645
ATGAAGAGAA CACATTTGGC AAGTTTTAGT AACAGAGACA AAACCCAAGA 
50
AGAAGAAGGA GAAGACGGTA ATGGTGACAA CAGAGTCATC ATGAATCACT 
100
ACAAGAATTA CGAAGCTGGG CTGATCCCAT GGCCTCCCAA GAATTACACT 
150
TGCAGCTTCT GCAGGAGAGA GTTCAGATCT GCTCAAGCAC TTGGAGGCCA 
200
CATGAATGTT CATAGAAGAG ACAGAGCAAA ACTCAGGCAG ATCCCTTCTT 
250
GGCTCTTCGA ACCTCACCAC CACACACCTA TTGCAAACCC TAACCCTAAT 
300
TTTAGCTCTT CTTCTTCCTC TTCAACAACA ACAGCTCATC TTGAGCCTTC 
350
CCTAACCAAC CAGAGATCCA AAACCACTCC TTTTCCTTCT GCCCGGTTTG 
400
ATCTTTTGGA CAGTACTACT AGCTATGGAG GTTTGATGAT GGACAGAGAG 
450
AAGAACAAGA GCAATGTATG TAGCAGAGAG ATCAAGAAAA GTGCCATCGA 
500
TGCATGTCAT TCAGTAAGAT GTGAGATAAG CCGTGGGGAT CTGATGAATA 
550
AGAAAGATGA TCAAGTCATG GGGTTGGAGC TTGGGATGAG TTTGAGGAAT 
600
CCCAACCAAG TTCTTGATTT GGAGCTTCGA CTAGGCTACC TCTAA
650

>AT2G42410.1 longest ORF length:214
MKRTHLASFS NRDKTQEEEG EDGNGDNRVI MNHYKNYEAG LIPWPPKNYT 
50
CSFCRREFRS AQALGGHMNV HRRDRAKLRQ IPSWLFEPHH HTPIANPNPN 
100
FSSSSSSSTT TAHLEPSLTN QRSKTTPFPS ARFDLLDSTT SYGGLMMDRE 
150
KNKSNVCSRE IKKSAIDACH SVRCEISRGD LMNKKDDQVM GLELGMSLRN 
200
PNQVLDLELR LGYL
250