Locus |
Common name |
Short description |
AT2G42660 |
|
Homeodomain-like superfamily protein (.1) |
>AT2G42660.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
10 |
EcoRV
| GAT|ATC |
715 |
SalI
| G|TCGAC |
747 |
XhoI
| C|TCGAG |
319, 580 |
Click here to view TAIR data
>AT2G42660.1 length:768
ATGGCCGGGA GATCTTCGCC GGGAAAATGC TCCACGTGGC TTGACCTGAA | 50 |
CAGAGAAGAA ACAGTGGAGA AGAACAATGA AGAAGAGTCA TCAGTGGAAG | 100 |
ACGAAGACCA AATCACGAAT AACGTTAGAC AGTATATTCG GTCCAACATG | 150 |
CCTCGGCTTC GTTGGACGCC TGATCTTCAT CTCTCCTTCG TTCGTGCTGT | 200 |
CCAACGACTA GGCGGTCCAG ACAGAGCGAC GCCGAAATTG GTTCTTGAGA | 250 |
TGATGAATCT AAAAGGATTG AGTATTGCAC ATGTCAAGAG TCATTTACAG | 300 |
ATGTATCGAA GTAAGAAGCT CGAGCCGTCT TCTCGCCCTG GATTTGGAGC | 350 |
TTTCATGAGT GGACAAAGAA GCTATTTGAT GGACATGATC GACTCTCGAT | 400 |
GTATCCCTCA TAGCGATTTA AGACATGCCT ATAACTCTAA AACCGTTCCT | 450 |
TCGAGGGTAC TCAATCAAGA CGCGGTCGTT ACAAATCTTG GAGGTAACTT | 500 |
TCTTATGCGA CCTTCGAGCT GGTTTAGCGG GTTATGCAGA AATGACCGAG | 550 |
ACAGCACAGA GAACAAGACT CTGCCTCTAC TCGAGATTAG GAAGAAGAAC | 600 |
AATGAGAAAA GAGTCCGAGA TGAAGAAGTA TCATCAGTCA AACGATTGAA | 650 |
ATCAATGTCC GGAGGTGGGA TACAGTTGCC TGAGTTTGGA AATTGCAGGC | 700 |
AAAAACCAAC AGATGATATC AACACAATGC TCTCGCTCTC TCTGTTGTCG | 750 |
ACATCATCAG AACCGTAA | 800 |
>AT2G42660.1 longest ORF length:255
MAGRSSPGKC STWLDLNREE TVEKNNEEES SVEDEDQITN NVRQYIRSNM | 50 |
PRLRWTPDLH LSFVRAVQRL GGPDRATPKL VLEMMNLKGL SIAHVKSHLQ | 100 |
MYRSKKLEPS SRPGFGAFMS GQRSYLMDMI DSRCIPHSDL RHAYNSKTVP | 150 |
SRVLNQDAVV TNLGGNFLMR PSSWFSGLCR NDRDSTENKT LPLLEIRKKN | 200 |
NEKRVRDEEV SSVKRLKSMS GGGIQLPEFG NCRQKPTDDI NTMLSLSLLS | 250 |
TSSEP | 300 |
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