Locus |
Common name |
Short description |
AT2G42940 |
|
Predicted AT-hook DNA-binding family protein (.1) |
>AT2G42940.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
37 |
EcoRV
| GAT|ATC |
727 |
Click here to view TAIR data
>AT2G42940.1 length:774
ATGGCTGGAG GTACAGCTCT AACTCCAACC TCTGTAGGAT CCAAGTCTGT | 50 |
TCCAATGAGG AACCATGAAG CAACAGAGAG AGGCAACACC AACAACAACC | 100 |
TGAGAGCATT ACCCAAAGCC GTCCAACCGG TTTCATCAAT CGAAGGAGAG | 150 |
ATGGCTAAGA GGCCACGTGG CAGACCCGCT GGCTCCAAGA ACAAACCCAA | 200 |
ACCACCAATC ATTGTGACTC ACGACAGTCC AAATTCCCTC AGAGCTAACG | 250 |
CCGTTGAGAT CAGCTCAGGT TGTGACATCT GTGAGACTTT ATCGGATTTT | 300 |
GCAAGAAGGA AACAGAGAGG TCTCTGCATT CTCAGTGCCA ATGGTTGTGT | 350 |
CACCAATGTG ACATTAAGGC AACCAGCTTC ATCAGGAGCA ATTGTCACAT | 400 |
TACACGGACG TTACGAGATC CTCTCATTGC TTGGATCAAT CTTGCCTCCA | 450 |
CCAGCACCAC TTGGAATAAC TGGTCTGACC ATTTACTTAG CCGGACCTCA | 500 |
AGGACAGGTT GTTGGTGGAG GAGTGGTTGG TGGGCTAATC GCATCTGGTC | 550 |
CTGTTGTTCT CATGGCTGCA TCTTTCATGA ATGCTGTTTT TGATCGTCTT | 600 |
CCTATGGATG ATGATGAAGC TGCCTCTATG CAGAACCAGC AGTACTACCA | 650 |
GAATGGAAGA TCCCGTCCTT TAGATGACAT TCATGGACTG CCTCAAAATC | 700 |
TGCTCACTAA TGGAAACTCG GCTTCTGATA TCTACTCTTG GGGGCCTGCG | 750 |
CAGCGTGTCA TGTCGAAACC TTAA | 800 |
>AT2G42940.1 longest ORF length:257
MAGGTALTPT SVGSKSVPMR NHEATERGNT NNNLRALPKA VQPVSSIEGE | 50 |
MAKRPRGRPA GSKNKPKPPI IVTHDSPNSL RANAVEISSG CDICETLSDF | 100 |
ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP | 150 |
PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL | 200 |
PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA | 250 |
QRVMSKP | 300 |
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