Locus |
Common name |
Short description |
AT2G43000 |
ANAC042, JUB1, JUNGBRUNNEN1 |
NAC domain containing protein 42 (.1) |
>AT2G43000.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
796 |
EcoRI
| G|AATTC |
418 |
EcoRV
| GAT|ATC |
160 |
StyI
| C|C[AT][AT]GG |
178 |
Click here to view TAIR data
>AT2G43000.1 length:828
ATGAGTGGCG AAGGTAACTT AGGTAAGGAT CATGAAGAAG AAAACGAAGC | 50 |
ACCACTTCCT GGGTTCAGGT TTCATCCGAC GGATGAAGAG CTTTTAGGAT | 100 |
ACTATCTTCG AAGAAAAGTA GAGAACAAAA CCATCAAACT CGAACTTATC | 150 |
AAACAGATCG ATATCTATAA GTACGATCCT TGGGATCTTC CAAGAGTGAG | 200 |
CAGCGTCGGA GAAAAGGAGT GGTACTTCTT CTGCATGAGA GGTAGGAAAT | 250 |
ACAGGAATAG CGTTCGACCA AACCGAGTGA CCGGTTCAGG TTTCTGGAAA | 300 |
GCCACTGGTA TTGATAAACC GGTTTACTCC AATCTTGACT GTGTTGGTCT | 350 |
CAAGAAATCT CTGGTTTACT ATCTTGGTTC AGCCGGTAAA GGCACCAAAA | 400 |
CCGATTGGAT GATGCATGAA TTCCGCCTCC CCTCCACCAC GAAAACCGAC | 450 |
TCTCCAGCTC AACAAGCAGA GGTATGGACA CTTTGCAGAA TCTTCAAACG | 500 |
AGTCACATCT CAAAGAAACC CAACCATCTT ACCACCAAAC CGAAAACCGG | 550 |
TTATCACTTT AACCGACACT TGTTCTAAGA CCAGCAGCTT AGATTCCGAC | 600 |
CACACGAGCC ACCGTACAGT AGATTCCATG TCCCACGAGC CGCCGCTTCC | 650 |
ACAGCCACAG AATCCTTATT GGAACCAACA TATAGTTGGT TTTAATCAAC | 700 |
CGACATATAC TGGTAATGAT AATAACCTCC TGATGAGTTT CTGGAACGGC | 750 |
AACGGTGGAG ATTTCATAGG AGACTCAGCA AGTTGGGATG AACTTAGATC | 800 |
TGTTATAGAT GGCAACACTA AACCCTAG | 850 |
>AT2G43000.1 longest ORF length:275
MSGEGNLGKD HEEENEAPLP GFRFHPTDEE LLGYYLRRKV ENKTIKLELI | 50 |
KQIDIYKYDP WDLPRVSSVG EKEWYFFCMR GRKYRNSVRP NRVTGSGFWK | 100 |
ATGIDKPVYS NLDCVGLKKS LVYYLGSAGK GTKTDWMMHE FRLPSTTKTD | 150 |
SPAQQAEVWT LCRIFKRVTS QRNPTILPPN RKPVITLTDT CSKTSSLDSD | 200 |
HTSHRTVDSM SHEPPLPQPQ NPYWNQHIVG FNQPTYTGND NNLLMSFWNG | 250 |
NGGDFIGDSA SWDELRSVID GNTKP | 300 |
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