Locus |
Common name |
Short description |
AT2G43060 |
AtIBH1, bHLH158 |
ILI1 binding bHLH 1 (.1) |
>AT2G43060.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
273 |
NcoI
| C|CATGG |
164 |
PstI
| CTGCA|G |
8 |
SacI
| GAGCT|C |
305 |
StyI
| C|C[AT][AT]GG |
164 |
Click here to view TAIR data
>AT2G43060.1 length:471
ATGGCCTCTG CAGACAAACT CATAAACACA GATGTCCCTG AAAAGGACGT | 50 |
TTTTGCCTTC CACTTCCTCC AATCCCTCTC AAATCTCAGA AAACAAAACC | 100 |
CTTTTGATAC TCCGGACCAA AAAAACTACC GCGTGAGGAA GATCAAGAAG | 150 |
GCTGCGTACG TTTCCATGGC CAGAGCAGCC GGAGGGAGTA GCCGGCTATG | 200 |
GAGCAGAGCC CTCTTGCGTA GAGCAGACAA AGATGACAAC AAGATCGTAA | 250 |
GATTTTCAAG GAGGAAGTGG AAGATATCAT CAAAACGGAG GAGGAGTAAC | 300 |
CAGAGAGCTC CGGTGGTGGA GGAGGCGGCG GAGAGGCTGA GGAATCTTGT | 350 |
TCCGGGAGGC GGAGGAATGG AGACGTCAAA GCTGATGGAA GAGACGGCTC | 400 |
ATTACATCAA GTGCCTTAGT ATGCAGGTCA AGGTCATGCA GTGTCTCGTT | 450 |
GATGGCTTAT CTCCCAAATG A | 500 |
>AT2G43060.1 longest ORF length:156
MASADKLINT DVPEKDVFAF HFLQSLSNLR KQNPFDTPDQ KNYRVRKIKK | 50 |
AAYVSMARAA GGSSRLWSRA LLRRADKDDN KIVRFSRRKW KISSKRRRSN | 100 |
QRAPVVEEAA ERLRNLVPGG GGMETSKLME ETAHYIKCLS MQVKVMQCLV | 150 |
DGLSPK | 200 |
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