fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G43060 AtIBH1, bHLH158 ILI1 binding bHLH 1 (.1)

>AT2G43060.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 273
NcoI C|CATGG 164
PstI CTGCA|G 8
SacI GAGCT|C 305
StyI C|C[AT][AT]GG 164


Click here to view TAIR data

>AT2G43060.1 length:471
ATGGCCTCTG CAGACAAACT CATAAACACA GATGTCCCTG AAAAGGACGT 
50
TTTTGCCTTC CACTTCCTCC AATCCCTCTC AAATCTCAGA AAACAAAACC 
100
CTTTTGATAC TCCGGACCAA AAAAACTACC GCGTGAGGAA GATCAAGAAG 
150
GCTGCGTACG TTTCCATGGC CAGAGCAGCC GGAGGGAGTA GCCGGCTATG 
200
GAGCAGAGCC CTCTTGCGTA GAGCAGACAA AGATGACAAC AAGATCGTAA 
250
GATTTTCAAG GAGGAAGTGG AAGATATCAT CAAAACGGAG GAGGAGTAAC 
300
CAGAGAGCTC CGGTGGTGGA GGAGGCGGCG GAGAGGCTGA GGAATCTTGT 
350
TCCGGGAGGC GGAGGAATGG AGACGTCAAA GCTGATGGAA GAGACGGCTC 
400
ATTACATCAA GTGCCTTAGT ATGCAGGTCA AGGTCATGCA GTGTCTCGTT 
450
GATGGCTTAT CTCCCAAATG A
500

>AT2G43060.1 longest ORF length:156
MASADKLINT DVPEKDVFAF HFLQSLSNLR KQNPFDTPDQ KNYRVRKIKK 
50
AAYVSMARAA GGSSRLWSRA LLRRADKDDN KIVRFSRRKW KISSKRRRSN 
100
QRAPVVEEAA ERLRNLVPGG GGMETSKLME ETAHYIKCLS MQVKVMQCLV 
150
DGLSPK
200