| Locus |
Common name |
Short description |
| AT2G44910 |
ATHB4, ATHB-4 |
ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4, homeobox-leucine zipper protein 4 (.1) |
>AT2G44910.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tsp509I, Tth111I, XbaI, XcmI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccII(FnuDII)
| CG|CG |
425 |
| AciI
| C|CGC |
312, 837, 849 |
| AflIII
| A|CPuPyGT |
822 |
| AhdI
| GACNNN|NNGTC |
240 |
| AluI
| AG|CT |
35, 271, 412, 511, 567, 645, 738 |
| AvaI
| C|PyCGPuG |
523 |
| BanII
| GPuGCPy|C |
272 |
| BfaI
| C|TAG |
575, 952 |
| BsaHI
| GPu|CGPyC |
235 |
| BsaJI
| C|CNNGG |
704, 916 |
| BsiHKAI
| G[AT]GC[AT]|C |
272 |
| BslI
| CCNNNNN|NNGG |
238 |
| BsoBI
| C|PyCGPuG |
523 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
272, 807 |
| BssKI
| |CCNGG |
238 |
| BstUI
| CG|CG |
425 |
| BstYI
| Pu|GATCPy |
369 |
| Cac8I
| GCN|NGC |
570 |
| DdeI
| C|TNAG |
33, 69, 249, 274, 351, 594, 741 |
| DpnI
| GA-CH3|TC |
368, 477, 506 |
| DpnII
| |GATC |
368, 477, 506 |
| DraI
| TTT|AAA |
535, 678 |
| DraIII
| CACNNN|GTG |
804 |
| EaeI
| Py|GGCCPu |
892 |
| Fnu4HI
| GC|NGC |
312, 719, 837, 852, 890 |
| HaeII
| PuGCGC|Py |
337 |
| HaeIII
| GG|CC |
891 |
| HhaI
| GCG|C |
336 |
| HinP1I
| G|CGC |
336 |
| HincII
| GTPy|PuAC |
50, 90 |
| HindIII
| A|AGCTT |
36 |
| HinfI
| G|ANTC |
29, 77, 161, 179, 347, 590, 710, 782 |
| HpaII
| C|CGG |
237 |
| Hpy188I
| TCN|GA |
68, 134, 231, 350, 557, 623, 698, 735 |
| Hpy99I
| CG[AT]CG| |
233, 317, 449, 473, 714 |
| HpyCH4III
| ACN|GT |
494, 584, 628, 843, 879 |
| HpyCH4IV
| A|CGT |
208, 261, 820 |
| HpyCH4V
| TG|CA |
126, 217, 720, 774 |
| MboI
| |GATC |
368, 477, 506 |
| MseI
| T|TAA |
204, 534, 552, 677, 908 |
| MslI
| CAPyNN|NNPuTG |
778 |
| MspA1I
| C[AC]G|C[GT]G |
851 |
| MspI
| C|CGG |
237 |
| MwoI
| GCNNNNN|NNGC |
411, 445, 469, 814 |
| N.BstNBI
| GAGTCNNNN|N |
34, 352 |
| NciI
| CC|[CG]GG |
238 |
| NlaIII
| CATG| |
124, 772, 778, 802 |
| NspI
| PuCATG|Py |
125, 773 |
| PaeR7I
| C|TCGAG |
523 |
| PstI
| CTGCA|G |
218, 721 |
| RsaI
| GT|AC |
210 |
| SacI
| GAGCT|C |
272 |
| Sau3AI
| |GATC |
368, 477, 506 |
| ScrFI
| CC|NGG |
238 |
| SfcI
| C|TPuPyAG |
218, 721 |
| SmlI
| C|TPyPuAG |
523 |
| StyI
| C|C[AT][AT]GG |
916 |
| Taqƒ¿I
| T|CGA |
344, 500, 522, 712 |
| TfiI
| G|A[AT]TC |
77, 161, 590, 710 |
| TliI
| C|TCGAG |
523 |
| TseI
| G|C[AT]GC |
719, 852 |
| Tsp45I
| |GT[CG]AC |
846 |
| TspRI
| NNCA[CG]TGNN| |
844 |
| XhoI
| C|TCGAG |
523 |
Click here to view TAIR data
>AT2G44910.1 length:957
ATGGGGGAAA GAGATGATGG GTTGGGTTTG AGTCTAAGCT TGGGAAATAG | 50 |
TCAACAAAAA GAACCATCTC TGAGGTTGAA TCTTATGCCG TTGACAACTT | 100 |
CTTCTTCTTC TTCTTCGTTT CAACACATGC ACAATCAGAA TAACAATAGC | 150 |
CATCCCCAGA AGATTCATAA CATCTCTTGG ACTCATCTGT TTCAATCTTC | 200 |
TGGGATTAAA CGTACAACTG CAGAGAGAAA CTCCGACGCC GGGTCATTTC | 250 |
TAAGAGGTTT CAACGTGAAC AGAGCTCAGT CTTCGGTGGC GGTAGTGGAC | 300 |
TTGGAAGAAG AAGCCGCCGT CGTCTCGTCT CCAAACAGCG CCGTTTCGAG | 350 |
TCTGAGTGGA AATAAAAGGG ATCTTGCGGT GGCGAGAGGA GGAGATGAAA | 400 |
ACGAGGCGGA GAGAGCTTCT TGCTCACGCG GAGGGGGAAG CGGTGGTAGC | 450 |
GACGATGAAG ACGGCGGAAA CGGCGACGGA TCAAGGAAGA AACTACGGTT | 500 |
ATCGAAGGAT CAAGCTCTTG TTCTCGAGGA GACTTTTAAA GAACATAGCA | 550 |
CTCTTAATCC GAAGCAAAAG CTGGCTCTAG CAAAACAGTT GAATCTAAGG | 600 |
GCAAGACAAG TTGAAGTGTG GTTTCAGAAC CGTAGGGCAA GGACGAAGCT | 650 |
GAAACAAACG GAGGTTGATT GTGAGTATTT AAAGAGATGT TGCGATAATC | 700 |
TGACCGAGGA GAATCGACGG CTGCAGAAAG AAGTGTCGGA GCTGAGGGCG | 750 |
TTGAAGTTGT CTCCACATCT CTACATGCAC ATGACTCCTC CTACTACTCT | 800 |
CACCATGTGC CCTTCTTGCG AACGTGTCTC CTCCTCTGCC GCCACTGTGA | 850 |
CCGCTGCTCC TTCCACTACT ACTACTCCTA CGGTGGTGGG GCGGCCAAGT | 900 |
CCACAGCGAT TAACTCCTTG GACTGCTATT TCTCTCCAGC AAAAATCAGG | 950 |
TCGCTAG | 1000 |
>AT2G44910.1 longest ORF length:318
MGERDDGLGL SLSLGNSQQK EPSLRLNLMP LTTSSSSSSF QHMHNQNNNS | 50 |
HPQKIHNISW THLFQSSGIK RTTAERNSDA GSFLRGFNVN RAQSSVAVVD | 100 |
LEEEAAVVSS PNSAVSSLSG NKRDLAVARG GDENEAERAS CSRGGGSGGS | 150 |
DDEDGGNGDG SRKKLRLSKD QALVLEETFK EHSTLNPKQK LALAKQLNLR | 200 |
ARQVEVWFQN RRARTKLKQT EVDCEYLKRC CDNLTEENRR LQKEVSELRA | 250 |
LKLSPHLYMH MTPPTTLTMC PSCERVSSSA ATVTAAPSTT TTPTVVGRPS | 300 |
PQRLTPWTAI SLQQKSGR | 350 |
|