fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT2G45050 GATA2 GATA transcription factor 2 (.1)

>AT2G45050.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 362


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>AT2G45050.1 length:795
ATGGACGTCT ATGGCTTATC TTCACCAGAC TTACTTCGAA TCGACGACCT 
50
TCTTGATTTC TCCAACGAAG ACATCTTCTC CGCTTCTTCT TCCGGTGGTT 
100
CCACCGCCGC TACTTCCTCT TCTTCTTTCC CTCCTCCTCA AAACCCTAGT 
150
TTCCACCACC ACCATCTCCC TTCCTCCGCC GATCATCACT CCTTCCTCCA 
200
CGACATTTGC GTTCCCAGTG ATGACGCAGC TCATCTTGAA TGGCTTTCGC 
250
AATTCGTGGA CGATTCTTTC GCTGATTTTC CGGCGAATCC ATTAGGAGGA 
300
ACTATGACTT CTGTCAAAAC TGAAACTTCC TTTCCGGGGA AACCAAGAAG 
350
CAAACGATCA AGAGCTCCTG CTCCTTTCGC CGGAACATGG TCTCCGATGC 
400
CACTGGAATC CGAGCATCAG CAGCTTCACT CCGCCGCCAA ATTCAAGCCA 
450
AAGAAAGAAC AATCCGGCGG AGGAGGAGGA GGAGGAGGAA GACATCAGTC 
500
ATCGTCATCG GAGACTACGG AAGGAGGAGG AATGAGGAGA TGTACTCACT 
550
GTGCATCGGA GAAAACGCCA CAGTGGAGGA CAGGACCACT TGGACCTAAA 
600
ACACTATGTA ACGCTTGTGG AGTCCGGTTT AAATCCGGTA GACTTGTACC 
650
GGAATATAGA CCGGCTTCGA GTCCTACTTT TGTTTTGACT CAGCATTCAA 
700
ACTCTCACCG GAAAGTGATG GAGCTTCGAC GGCAGAAAGA AGTTATGAGA 
750
CAACCACAAC AAGTTCAACT TCATCACCAC CACCACCCGT TTTAG
800

>AT2G45050.1 longest ORF length:264
MDVYGLSSPD LLRIDDLLDF SNEDIFSASS SGGSTAATSS SSFPPPQNPS 
50
FHHHHLPSSA DHHSFLHDIC VPSDDAAHLE WLSQFVDDSF ADFPANPLGG 
100
TMTSVKTETS FPGKPRSKRS RAPAPFAGTW SPMPLESEHQ QLHSAAKFKP 
150
KKEQSGGGGG GGGRHQSSSS ETTEGGGMRR CTHCASEKTP QWRTGPLGPK 
200
TLCNACGVRF KSGRLVPEYR PASSPTFVLT QHSNSHRKVM ELRRQKEVMR 
250
QPQQVQLHHH HHPF
300